Study Detail

TitleSalmonella Paratyphi A diversity (test pool)
Study TypeWhole Genome Sequencing
Abstract "Holt et al, 2009. Bioinformatics, 25(16):2074-2075. Summary: Here, we present a method for estimating the frequencies of SNP alleles present within pooled samples of DNA using high-throughput short-read sequencing. The method was tested on real d .. [more]
Description As of 2008, there were two finished genome sequences available for Salmonella Paratyphi A: ATCC9150 (EMBL:CP000026) and AKU_12601 (EMBL:FM200053). In this study, ATTC9150 and an additional 5 S. Paratyphi A isolates were sequenced using Illumina sequencing (one lane per isolate, 35 bp single-end read .. [more]
Center NameSC