Search Results ( 371 studies )

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#STUDYSUBMISSIONSTUDY_TITLESTUDY_TYPEORGANISM BASESSUBMITTEDCENTER_NAME
1 DRP003773 DRA005399 JGRID-TOKAI Other synthetic metagenome 160.1M 2016-12-22 TOKAI
2 DRP003908 DRA005118 Bacterial composition in precipitation collected in Japan over one and half years Other aquatic metagenome
freshwater metagenome
synthetic metagenome
74M 2016-09-08 UT_CB
3 DRP004586 DRA005271 The detection of eDNA from all 19 species and subspecies of the genus Anguilla Other freshwater metagenome
riverine metagenome
seawater metagenome
synthetic metagenome
91.5M 2016-11-18 NUBS
4 DRP005417 DRA008143 Comparison of sequencing bias for library preparation kit Other Brachyspira pilosicoli
Escherichia coli O157:H7 str. Sakai
Escherichia coli str. K-12 substr. MG1655
Klebsiella aerogenes
Mammaliicoccus sciuri
Mycobacterium interjectum
Mycobacterium malmoense
Serratia liquefaciens
Staphylococcus aureus MW2
Staphylococcus aureus subsp. aureus N315
Staphylococcus capitis
Staphylococcus caprae
Staphylococcus cohnii
Staphylococcus hominis
Staphylococcus hyicus
Staphylococcus intermedius
Staphylococcus lugdunensis
Staphylococcus pasteuri
Staphylococcus pseudintermedius
Staphylococcus saprophyticus
Staphylococcus schleiferi
Staphylococcus simulans
Staphylococcus warneri
Staphylococcus xylosus
Streptobacillus moniliformis
Tsukamurella pulmonis
synthetic metagenome
95.2G 2019-02-13 KYUSH-MS
5 DRP005931 DRA009827 16S gene (V3V4) and tuf gene amplicon sequencings of human hand Other human skin metagenome
synthetic metagenome
12.6G 2020-03-05 KAO
6 DRP006019 DRA009985 Comparative analysis of Mock microbial community Other synthetic metagenome 6.3G 2020-04-02 RIKEN_CSRS
7 DRP006338 DRA010097 16s rRNA amplicon sequencing by MinION for characterization of complex microbial communities of human gut Other human gut metagenome
synthetic metagenome
1.5G 2020-03-17 KANSAI_MED
8 DRP006457 DRA010213 Microbial interaction between the succinate-utilizing bacterium Phascolarctobacterium faecium and the gut commensal Bacteroides thetaiotaomicron Other Bacteroides thetaiotaomicron VPI-5482
Phascolarctobacterium faecium
synthetic metagenome
34.3G 2020-05-13 NIG
9 DRP006794 DRA007783 Microbiome in coral skeleton at Tuvalu Other coral reef metagenome
synthetic metagenome
38.5M 2018-12-14 UT_EPS
10 DRP006804 DRA011212
DRA011654
Analysis of the equine gut microbe using 16S-ITS-23S rRNA operon amplicon sequencing Other gut metagenome
synthetic metagenome
10.3G 2020-11-26 JRA
11 DRP007029 DRA010052 Evaluation of PCR conditions for characterizing bacterial community with full-length 16S rRNA genes using a portable Nanopore sequencer Other Vibrio cholerae
biofilm metagenome
freshwater metagenome
synthetic metagenome
4.9G 2020-04-13 HIROSHIMA
12 DRP007211 DRA011889 Analysis of eukaryotic microbiome in ticks Using blocker artificial nucleic acids and non-metazoan PCR Other synthetic metagenome
tick metagenome
11.3G 2021-04-20 HOKUDAI
13 ERP003492 ERA234736 Practical innovations for high-throughput amplicon sequencing Metagenomics Arabidopsis thaliana
endophyte metagenome
freshwater metagenome
leaf metagenome
root metagenome
soil metagenome
synthetic metagenome
6.8G HHMI-UNC
14 ERP003874 ERA249225 synthetic sequence dataset database metagenome Metagenomics synthetic metagenome 32.8M FLIDE
15 ERP003999 ERA252240
ERA252241
ERA358178
ERA450182
ERA452499
Comparison of 454 and Illumina 16S sequencing Metagenomics human gut metagenome
metagenome
synthetic metagenome
1.6G UCONNMISEQ
16 ERP004443 ERA276709 Reducing erroneous identification using Miseq system Metagenomics pig metagenome
synthetic metagenome
4.2G CLM
17 ERP006614 ERA345535
ERA345919
ERA347220
Evaluation of methods to purify virus-like particles for the sequencing of intestinal viromes Other synthetic metagenome 23.4G UT SOUTHWESTERN MEDICAL CENTER
18 ERP009691 ERA413155 Experimental Metagenome on MinION Other Escherichia coli
Microcystis aeruginosa
Pseudomonas fluorescens
Synechococcus elongatus
synthetic metagenome
VIRGINIA COMMONWEALTH UNIVERSITY
19 ERP009740 ERA416011 Experimental Metagenome on MinION Metagenomics synthetic metagenome 34.6M VIRGINIA COMMONWEALTH UNIVERSITY
20 ERP011914 ERA474057
ERA477866
Every base matters: assessing small subunit rRNA primers for marine microbiomes with mock communities, time-series and global field samples Other seawater metagenome
synthetic metagenome
3.6G UNIVERSITY OF SOUTHERN CALIFORNIA