Search Results ( 9 studies )

/ 1
#STUDYSUBMISSIONSTUDY_TITLESTUDY_TYPEORGANISM BASESSUBMITTEDCENTER_NAME
1 ERP009142 ERA450049
ERA520650
ERA552059
ERA886765
ERA990537
Genomic_characterization_of_bladder_bacteria_from_healthy_and_infected_women Metagenomics Acinetobacter ursingii
Actinomyces graevenitzii
Actinomyces naeslundii
Actinomyces oris
Actinomyces urogenitalis
Actinotignum schaalii
Aerococcus christensenii
Aerococcus sanguinicola
Aerococcus urinae
Aerococcus viridans
Alloscardovia omnicolens
Anaerococcus octavius
Anaerococcus vaginalis
Arthrobacter sp.
Bacillus infantis
Bifidobacterium bifidum
Bifidobacterium breve
Bifidobacterium dentium
Bifidobacterium longum
Brevibacterium paucivorans
Brevibacterium ravenspurgense
Campylobacter ureolyticus
Citrobacter freundii
Corynebacterium amycolatum
Corynebacterium aurimucosum
Corynebacterium coyleae
Corynebacterium freneyi
Corynebacterium imitans
Corynebacterium matruchotii
Corynebacterium minutissimum
Corynebacterium riegelii
Corynebacterium tuberculostearicum
Corynebacterium tuscaniense
Cutibacterium acnes
Cutibacterium avidum
Dermabacter hominis
Dialister micraerophilus
Enterobacter asburiae
Enterobacter cloacae
Enterobacter ludwigii
Enterococcus faecalis
Escherichia coli
Facklamia hominis
Finegoldia magna
Fusobacterium nucleatum
Gardnerella
Gardnerella vaginalis
Gemella haemolysans
Gemella morbillorum
Gemella sanguinis
Gleimia europaea
Globicatella sulfidifaciens
Haemophilus parainfluenzae
Klebsiella aerogenes
Klebsiella pneumoniae
Kocuria rhizophila
Kytococcus schroeteri
Lacticaseibacillus rhamnosus
Lactobacillus crispatus
Lactobacillus delbrueckii
Lactobacillus gasseri
Lactobacillus iners
Lactobacillus jensenii
Lactobacillus johnsonii
Lactobacillus sp.
Limosilactobacillus fermentum
Limosilactobacillus vaginalis
Microbacterium sp.
Micrococcus luteus
Micrococcus lylae
Moraxella osloensis
Morganella morganii
Neisseria flavescens
Neisseria macacae
Oligella urethralis
Peptoniphilus harei
Prevotella buccalis
Priestia megaterium
Proteus mirabilis
Pseudoglutamicibacter cumminsii
Pseudomonas aeruginosa
Rothia dentocariosa
Rothia mucilaginosa
Schaalia odontolytica
Schaalia radingae
Schaalia turicensis
Slackia exigua
Staphylococcus aureus
Staphylococcus epidermidis
Staphylococcus hominis
Staphylococcus lugdunensis
Staphylococcus pettenkoferi
Staphylococcus saprophyticus
Staphylococcus simulans
Staphylococcus warneri
Streptococcus agalactiae
Streptococcus anginosus
Streptococcus gallolyticus
Streptococcus gordonii
Streptococcus mitis
Streptococcus oralis
Streptococcus parasanguinis
Streptococcus pneumoniae
Streptococcus salivarius
Streptococcus sanguinis
Streptococcus vestibularis
Trueperella bernardiae
Veillonella parvula
Winkia neuii
uncultured bacterium
unidentified
234.2G SC
2 ERP023140 ERA932265 Genomic relatedness of Staphylococcus pettenkoferi isolates of different origins Whole Genome Sequencing Staphylococcus pettenkoferi 5.4G STATENS SERUM INSTITUT
3 SRP040661 SRA1058331
SRA1061013
SRA1088670
SRA1143220
SRA1150214
SRA1166121
SRA1194008
SRA149653
SRA550379
SRA704414
SRA795518
SRA807371
SRA880406
SRA889218
SRA891459
SRA916219
SRA949279
FDA-ARGOS is a database with public quality-controlled reference genomes for diagnostic use and regulatory science Other Abiotrophia defectiva
Achromobacter deleyi
Achromobacter denitrificans
Achromobacter insolitus
Achromobacter pestifer
Achromobacter xylosoxidans
Acinetobacter baumannii
Acinetobacter calcoaceticus
Acinetobacter haemolyticus
Acinetobacter johnsonii
Acinetobacter lwoffii
Acinetobacter nosocomialis
Acinetobacter pittii
Acinetobacter radioresistens
Acinetobacter sp. FDAARGOS_131
Acinetobacter sp. FDAARGOS_493
Acinetobacter sp. FDAARGOS_494
Acinetobacter sp. FDAARGOS_495
Acinetobacter sp. FDAARGOS_515
Acinetobacter sp. FDAARGOS_541
Acinetobacter sp. FDAARGOS_558
Acinetobacter sp. FDAARGOS_559
Acinetobacter sp. FDAARGOS_560
Acinetobacter sp. FDAARGOS_724
Acinetobacter ursingii
Actinomyces naeslundii
Actinomyces oris
Aerococcus urinae
Aerococcus viridans
Aeromonas allosaccharophila
Aeromonas caviae
Aeromonas hydrophila
Aeromonas jandaei
Aeromonas veronii
Aggregatibacter actinomycetemcomitans
Aggregatibacter aphrophilus
Aggregatibacter segnis
Agrobacterium sp. FDAARGOS_525
Agrobacterium tumefaciens
Alcaligenes faecalis
Amycolatopsis sp. FDAARGOS 1241
Anaerococcus vaginalis
Arachnia propionica
Argentinian mammarenavirus
Aspergillus niger
Atlantibacter hermannii
Bacillus anthracis
Bacillus cereus
Bacillus circulans
Bacillus licheniformis
Bacillus mycoides
Bacillus sp. (in: Bacteria)
Bacillus sp. FDAARGOS_235
Bacillus subtilis
Bacillus thuringiensis
Bacillus tropicus
Bacteroides caccae
Bacteroides cellulosilyticus
Bacteroides eggerthii
Bacteroides fragilis
Bacteroides ovatus
Bacteroides sp FDAARGOS 1223
Bacteroides sp FDAARGOS 1224
Bacteroides thetaiotaomicron
Bacteroides uniformis
Bartonella bacilliformis
Bartonella henselae str. Houston-1
Bifidobacterium breve
Bordetella bronchiseptica
Bordetella hinzii
Bordetella parapertussis
Bordetella pertussis
Bordetella pertussis 18323
Borreliella burgdorferi
Brevibacterium casei
Brevundimonas diminuta
Brevundimonas vesicularis
Brucella anthropi
Brucella canis
Budvicia aquatica
Bundibugyo ebolavirus
Burkholderia ambifaria
Burkholderia cenocepacia
Burkholderia cepacia
Burkholderia dolosa
Burkholderia gladioli
Burkholderia gladioli pv. gladioli
Burkholderia glumae
Burkholderia humptydooensis
Burkholderia mallei
Burkholderia multivorans
Burkholderia oklahomensis
Burkholderia plantarii
Burkholderia pseudomallei
Burkholderia thailandensis
Burkholderia vietnamiensis
Butyricimonas virosa
Campylobacter coli
Campylobacter jejuni
Campylobacter jejuni subsp. doylei
Campylobacter lari
Campylobacter upsaliensis
Campylobacter ureolyticus
Candida albicans
Candida parapsilosis
Capnocytophaga sp. FDAARGOS_737
Cedecea neteri
Cedecea sp. FDAARGOS_727
Chapare mammarenavirus
Chikungunya virus
Chromobacterium violaceum
Chryseobacterium arthrosphaerae
Chryseobacterium gleum
Chryseobacterium indologenes
Chryseobacterium sp. FDAARGOS 1104
Citrobacter amalonaticus
Citrobacter braakii
Citrobacter freundii
Citrobacter koseri
Citrobacter portucalensis
Citrobacter sp.
Citrobacter werkmanii
Clavispora lusitaniae
Clostridioides difficile
Clostridium perfringens
Clostridium sporogenes
Comamonas terrigena
Coprococcus comes
Corynebacterium amycolatum
Corynebacterium aurimucosum
Corynebacterium bovis
Corynebacterium diphtheriae
Corynebacterium glucuronolyticum
Corynebacterium jeikeium
Corynebacterium kroppenstedtii
Corynebacterium macginleyi
Corynebacterium minutissimum
Corynebacterium propinquum
Corynebacterium riegelii
Corynebacterium sp. FDAARGOS 1242
Corynebacterium striatum
Corynebacterium tuberculostearicum
Corynebacterium ulcerans
Corynebacterium urealyticum
Corynebacterium xerosis
Crimean-Congo hemorrhagic fever orthonairovirus
Cronobacter sakazakii
Cupriavidus gilardii
Cupriavidus metallidurans
Cupriavidus necator
Cupriavidus pauculus
Cutibacterium acnes
Delftia acidovorans
Delftia lacustris
Dengue virus
Dermabacter hominis
Dermacoccus nishinomiyaensis
Eastern equine encephalitis virus
Edwardsiella hoshinae
Edwardsiella tarda
Elizabethkingia anophelis
Elizabethkingia meningoseptica
Elizabethkingia miricola
Enterobacter asburiae
Enterobacter cancerogenus
Enterobacter cloacae
Enterobacter cloacae complex sp.
Enterobacter hormaechei
Enterobacter roggenkampii
Enterocloster bolteae
Enterocloster clostridioformis
Enterococcus avium
Enterococcus casseliflavus
Enterococcus durans
Enterococcus faecalis
Enterococcus faecium
Enterococcus gallinarum
Enterococcus hirae
Enterococcus sp. FDAARGOS_163
Enterococcus sp. FDAARGOS_375
Enterococcus sp. FDAARGOS_553
Erysipelatoclostridium ramosum
Escherichia coli
Escherichia coli O104:H4
Escherichia fergusonii
Fannyhessea vaginae
Finegoldia magna
Francisella tularensis
Fusobacterium canifelinum
Fusobacterium necrophorum
Gardnerella vaginalis
Gemella haemolysans
Gemella morbillorum
Gemella sanguinis
Gordonia bronchialis
Grimontia hollisae
Guanarito mammarenavirus
Haemophilus influenzae
Haemophilus parahaemolyticus
Haemophilus parainfluenzae
Hafnia alvei
Hafnia paralvei
Helicobacter pylori
Hendra henipavirus
Jonesia denitrificans
Kingella denitrificans
Klebsiella aerogenes
Klebsiella michiganensis
Klebsiella oxytoca
Klebsiella pneumoniae
Klebsiella quasipneumoniae
Klebsiella sp. FDAARGOS_511
Klebsiella variicola
Kocuria rhizophila
Kytococcus sedentarius
Lacrimispora saccharolytica
Lactobacillus crispatus
Lactobacillus jensenii
Lactococcus garvieae
Lactococcus lactis
Lassa mammarenavirus
Leclercia adecarboxylata
Legionella anisa
Legionella longbeachae
Legionella pneumophila
Legionella pneumophila subsp. pneumophila
Leishmania donovani
Lelliottia amnigena
Leptospira interrogans serovar Copenhageni
Leuconostoc falkenbergense
Leuconostoc mesenteroides
Leuconostoc pseudomesenteroides
Listeria innocua
Listeria monocytogenes
Listeria welshimeri
Lysinibacillus macroides
Machupo mammarenavirus
Macrococcus caseolyticus
Mammaliicoccus fleurettii
Mammaliicoccus sciuri
Mammaliicoccus vitulinus
Marburg marburgvirus
Micrococcus luteus
Micrococcus sp. FDAARGOS_333
Middle East respiratory syndrome-related coronavirus
Mobiluncus curtisii
Mobiluncus mulieris
Monkeypox virus
Moraxella catarrhalis
Moraxella nonliquefaciens
Moraxella osloensis
Morganella morganii
Mycobacterium avium subsp. paratuberculosis
Mycobacterium tuberculosis
Mycobacteroides abscessus
Mycolicibacterium smegmatis
Myroides odoratus
Neisseria cinerea
Neisseria gonorrhoeae
Neisseria meningitidis
Neisseria mucosa
Neisseria sicca
Nipah henipavirus
Nocardia brasiliensis
Nocardia sp. FDAARGOS_372
Oligella ureolytica
Oligella urethralis
Pantoea agglomerans
Pantoea ananatis
Pantoea sp. FDAARGOS_194
Parabacteroides distasonis
Paraburkholderia fungorum
Paraburkholderia ginsengisoli
Paracoccus yeei
Parvimonas micra
Pasteurella multocida
Pediococcus acidilactici
Pediococcus pentosaceus
Peptoniphilus asaccharolyticus
Peptoniphilus harei
Peribacillus psychrosaccharolyticus
Phocaeicola coprophilus
Phocaeicola vulgatus
Plesiomonas shigelloides
Pluralibacter gergoviae
Prevotella melaninogenica
Propionibacterium acidifaciens
Proteus mirabilis
Proteus penneri
Proteus vulgaris
Providencia alcalifaciens
Providencia rettgeri
Providencia stuartii
Pseudomonas aeruginosa
Pseudomonas balearica
Pseudomonas fluorescens
Pseudomonas fulva
Pseudomonas luteola
Pseudomonas monteilii
Pseudomonas oryzihabitans
Pseudomonas protegens
Pseudomonas putida
Pseudomonas sp. FDAARGOS_380
Pseudomonas sp. FDAARGOS_761
Pseudomonas stutzeri
Psychrobacter cryohalolentis
Psychrobacter sp. FDAARGOS_221
Ralstonia pickettii
Raoultella ornithinolytica
Raoultella planticola
Reston ebolavirus
Rhizobium pusense
Rhodanobacter sp. FDAARGOS 1247
Rhodococcus hoagii
Rift Valley fever virus
Roseobacter denitrificans
Roseomonas gilardii
Roseomonas sp. FDAARGOS_362
Ross River virus
Rothia aeria
Rothia dentocariosa
Rothia kristinae
Rothia mucilaginosa
Saccharomyces cerevisiae
Salmonella enterica
Salmonella enterica subsp. enterica serovar Bredeney
Salmonella enterica subsp. enterica serovar Hadar
Salmonella enterica subsp. enterica serovar Heidelberg
Salmonella enterica subsp. enterica serovar Infantis
Salmonella enterica subsp. enterica serovar Ohio
Salmonella enterica subsp. enterica serovar Paratyphi A
Salmonella enterica subsp. enterica serovar Saintpaul
Salmonella enterica subsp. enterica serovar Typhimurium
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-
Salmonella enterica subsp. houtenae
Schaalia meyeri
Schaalia odontolytica
Serratia fonticola
Serratia liquefaciens
Serratia marcescens
Serratia odorifera
Serratia plymuthica
Serratia rubidaea
Serratia sp. FDAARGOS_506
Serratia ureilytica
Severe acute respiratory syndrome coronavirus 2
Shewanella putrefaciens
Shewanella sp. FDAARGOS_354
Shigella boydii
Shigella flexneri
Shigella sonnei
Sphingobacterium multivorum
Sphingobacterium spiritivorum
Sphingomonas paucimobilis
Staphylococcus aureus
Staphylococcus auricularis
Staphylococcus capitis
Staphylococcus carnosus
Staphylococcus cohnii
Staphylococcus condimenti
Staphylococcus epidermidis
Staphylococcus equorum
Staphylococcus felis
Staphylococcus haemolyticus
Staphylococcus hominis
Staphylococcus lugdunensis
Staphylococcus pasteuri
Staphylococcus pettenkoferi
Staphylococcus pseudintermedius
Staphylococcus saccharolyticus
Staphylococcus saprophyticus
Staphylococcus simulans
Staphylococcus sp. FDAARGOS_39
Staphylococcus warneri
Stenotrophomonas maltophilia
Streptobacillus moniliformis
Streptococcus agalactiae
Streptococcus anginosus
Streptococcus constellatus
Streptococcus dysgalactiae
Streptococcus equinus
Streptococcus gallolyticus
Streptococcus gordonii
Streptococcus infantarius
Streptococcus intermedius
Streptococcus lutetiensis
Streptococcus mitis
Streptococcus mutans
Streptococcus oralis
Streptococcus pyogenes
Streptococcus salivarius
Streptococcus sanguinis
Streptococcus sp. 'group B'
Streptococcus sp. FDAARGOS_146
Streptococcus sp. FDAARGOS_192
Streptococcus sp. FDAARGOS_256
Streptococcus sp. FDAARGOS_520
Streptococcus sp. FDAARGOS_521
Streptococcus sp. FDAARGOS_522
Streptomyces californicus
Sudan ebolavirus
Sutterella wadsworthensis
Tai Forest ebolavirus
Veillonella parvula
Venezuelan equine encephalitis virus
Vibrio alginolyticus
Vibrio cholerae
Vibrio diabolicus
Vibrio fluvialis
Vibrio furnissii
Vibrio harveyi
Vibrio mimicus
Vibrio parahaemolyticus
Vibrio vulnificus
Weissella paramesenteroides
Weizmannia coagulans
West Nile virus
Yellow fever virus
Yersinia enterocolitica
Yersinia frederiksenii
Yersinia intermedia
Yersinia kristensenii
Yersinia pestis
Yersinia pseudotuberculosis
Yersinia sp. FDAARGOS_228
Zaire ebolavirus
Zika virus
[Clostridium] scindens
[Haemophilus] ducreyi
[Ruminococcus] gnavus
5.3T BioProject
4 SRP049998 SRA201934 Bacterial isolates from intensive care units Other Achromobacter xylosoxidans
Acinetobacter baumannii
Acinetobacter bereziniae
Acinetobacter nosocomialis
Acinetobacter pittii
Acinetobacter seifertii
Acinetobacter sp. 243_ASPC
Acinetobacter ursingii
Actinomyces urogenitalis
Aeromonas hydrophila
Aggregatibacter segnis
Alloscardovia omnicolens
Arcanobacterium haemolyticum
Bacillus cereus
Bacillus sp. 220_BSPC
Bacillus sp. 445_BSPC
Bacillus sp. 522_BSPC
Bacillus subtilis subsp. subtilis
Bacteroides fragilis
Bacteroides thetaiotaomicron
Bifidobacterium scardovii
Burkholderia cenocepacia
Burkholderia cepacia
Burkholderia multivorans
Capnocytophaga ochracea
Cardiobacterium hominis
Carnobacterium maltaromaticum
Carnobacterium sp. 1290_CSPC
Cellulomonas flavigena
Citrobacter braakii
Citrobacter freundii
Citrobacter koseri
Clostridium botulinum
Clostridium perfringens
Clostridium sporogenes
Corynebacterium aurimucosum
Corynebacterium falsenii
Corynebacterium halotolerans
Corynebacterium jeikeium
Corynebacterium propinquum
Corynebacterium sp. 212_CJEI
Corynebacterium sp. 401_CJEI
Corynebacterium sp. 805_CJEI
Corynebacterium striatum
Corynebacterium urealyticum
Corynebacterium vitaeruminis
Cutibacterium acnes
Cutibacterium avidum
Eikenella corrodens
Enterobacter asburiae
Enterobacter bugandensis
Enterobacter cloacae
Enterobacter hormaechei
Enterobacter hormaechei subsp. hoffmannii
Enterobacter hormaechei subsp. oharae
Enterobacter hormaechei subsp. steigerwaltii
Enterobacter kobei
Enterobacter ludwigii
Enterobacter roggenkampii
Enterobacter sp. 940_PEND
Enterococcus avium
Enterococcus faecalis
Enterococcus faecium
Enterococcus hirae
Enterococcus sp. 1140_ESPC
Enterococcus sp. 255_ESPC
Escherichia coli
Franconibacter helveticus
Gemella sanguinis
Haemophilus influenzae
Haemophilus parainfluenzae
Hafnia paralvei
Isoptericola variabilis
Klebsiella aerogenes
Klebsiella michiganensis
Klebsiella oxytoca
Klebsiella pneumoniae
Klebsiella pneumoniae subsp. ozaenae
Klebsiella pneumoniae subsp. pneumoniae
Klebsiella quasipneumoniae subsp. quasipneumoniae
Klebsiella quasipneumoniae subsp. similipneumoniae
Klebsiella variicola
Kytococcus sedentarius
Lacticaseibacillus casei
Lacticaseibacillus paracasei
Lacticaseibacillus rhamnosus
Lactobacillus gasseri
Leifsonia xyli
Leuconostoc citreum
Ligilactobacillus salivarius
Limosilactobacillus fermentum
Micrococcus luteus
Moraxella canis
Moraxella catarrhalis
Morganella morganii
Morococcus cerebrosus
Mycoplasma hominis
Naumovozyma dairenensis
Neisseria bacilliformis
Neisseria elongata subsp. glycolytica
Neisseria lactamica
Neisseria meningitidis
Oligella urethralis
Pantoea vagans
Pasteurella multocida
Prevotella bivia
Prevotella buccae
Prevotella denticola
Proteus mirabilis
Pseudomonas aeruginosa
Pseudomonas denitrificans (nom. rej.)
Pseudomonas putida
Pseudomonas stutzeri
Ralstonia solanacearum
Raoultella ornithinolytica
Raoultella planticola
Rothia dentocariosa
Rothia mucilaginosa
Sanguibacter keddieii
Serratia liquefaciens
Serratia marcescens
Serratia sp. 506_PEND
Shigella boydii
Shigella dysenteriae
Shigella sonnei
Staphylococcus argenteus
Staphylococcus aureus
Staphylococcus capitis
Staphylococcus epidermidis
Staphylococcus haemolyticus
Staphylococcus hominis
Staphylococcus pasteuri
Staphylococcus pettenkoferi
Staphylococcus saprophyticus
Staphylococcus warneri
Stenotrophomonas maltophilia
Streptococcus agalactiae
Streptococcus anginosus
Streptococcus constellatus
Streptococcus cristatus
Streptococcus dysgalactiae
Streptococcus gordonii
Streptococcus intermedius
Streptococcus mitis
Streptococcus mutans
Streptococcus oralis
Streptococcus parasanguinis
Streptococcus pasteurianus
Streptococcus pneumoniae
Streptococcus pseudopneumoniae
Streptococcus pyogenes
Streptococcus salivarius
Streptococcus sanguinis
Streptococcus sp. 1004_SSPC
Streptococcus sp. 1171_SSPC
Streptococcus sp. 263_SSPC
Streptococcus sp. 343_SSPC
Streptococcus sp. 400_SSPC
Streptococcus sp. 449_SSPC
Streptococcus thermophilus
Streptomyces cattleya
Trueperella pyogenes
Xylanimonas cellulosilytica
Yarrowia lipolytica
139.8G BioProject
5 SRP056445 SRA1014430
SRA1014440
SRA1015497
SRA1015499
SRA1015501
SRA1015505
SRA1021321
SRA1053451
SRA1055555
SRA1055623
SRA1055634
SRA1055656
SRA1055690
SRA268982
SRA277038
SRA280946
SRA293209
SRA296492
SRA297181
SRA297763
SRA299356
SRA302337
SRA312210
SRA312426
SRA322898
SRA332471
SRA353599
SRA394979
SRA406339
SRA429336
SRA430363
SRA430397
SRA442296
SRA451326
SRA451327
SRA472222
SRA479768
SRA502222
SRA502239
SRA505341
SRA505342
SRA536265
SRA545774
SRA550670
SRA551958
SRA554066
SRA584236
SRA584583
SRA590630
SRA596552
SRA605316
SRA609046
SRA612789
SRA619098
SRA619422
SRA622226
SRA628025
SRA628167
SRA629099
SRA632301
SRA672034
SRA676333
SRA683384
SRA696871
SRA699411
SRA769315
SRA821908
SRA831905
SRA832411
SRA835373
SRA835744
SRA837601
SRA842250
SRA844837
SRA891604
SRA893681
SRA893685
SRA893687
SRA893691
SRA893692
SRA893693
SRA893694
SRA893705
SRA893706
SRA893707
SRA893708
SRA893709
SRA893710
SRA893711
SRA893712
SRA893713
SRA893714
SRA893715
SRA893719
SRA893720
SRA893723
SRA893724
SRA893725
SRA893726
SRA893727
SRA915801
SRA915808
SRA915832
SRA915840
SRA928684
SRA928687
SRA928697
SRA928703
SRA928706
SRA928708
SRA928720
SRA928721
SRA928743
SRA928781
SRA928790
SRA945274
SRA945276
SRA945277
SRA945285
SRA945286
SRA945288
SRA945303
SRA945310
SRA945311
SRA945312
SRA945314
SRA945318
SRA945332
SRA945335
SRA945337
SRA945338
SRA945341
SRA945356
SRA945358
SRA945377
SRA945397
SRA945421
SRA945437
SRA945441
SRA945458
SRA945480
SRA945489
SRA945490
SRA945491
SRA996779
SRA996780
SRA996785
SRA996799
SRA996811
SRA996815
SRA996820
SRA996868
SRA996881
SRA996885
Antimicrobial Surveillance from Brigham & Women's Hospital, Boston MA Other Achromobacter
Acinetobacter baumannii
Acinetobacter calcoaceticus
Acinetobacter nosocomialis
Acinetobacter sp. 0000-0051-1906
Acinetobacter sp. 0000-0051-1909
Acinetobacter sp. 0000-0051-8448
Acinetobacter sp. 0000-0052-5682
Acinetobacter sp. 0000-0052-7200
Acinetobacter sp. 0000-0053-2562
Acinetobacter sp. 0000-0060-4277
Acinetobacter ursingii
Bacillus cereus
Bacillus sp. 0000-0070-1109
Bacillus sp. 504
Burkholderia contaminans
Burkholderia multivorans
Burkholderia pyrrocinia
Campylobacter jejuni
Citrobacter freundii
Citrobacter sp. 0000-0054-3051
Clostridioides difficile
Clostridium tertium
Corynebacterium striatum
Desulfovibrio desulfuricans
Enterobacter asburiae
Enterobacter cloacae
Enterobacter hormaechei
Enterobacter kobei
Enterobacter ludwigii
Enterobacter roggenkampii
Enterococcus faecalis
Enterococcus faecium
Escherichia coli
Escherichia coli O157:H7
Klebsiella aerogenes
Klebsiella oxytoca
Klebsiella pneumoniae
Klebsiella variicola
Lachnoclostridium
Listeria monocytogenes
Morganella morganii
Neisseria elongata subsp. nitroreducens
Proteus mirabilis
Proteus vulgaris
Pseudomonas aeruginosa
Salmonella enterica
Salmonella enterica subsp. enterica serovar Typhimurium
Salmonella sp.
Salmonella sp. 0000-0021-0884
Salmonella sp. 0000-0051-8442
Salmonella sp. 0000-0053-3947
Salmonella sp. 0000-0053-3958
Salmonella sp. 0000-0053-3961
Salmonella sp. 0000-0053-5923
Salmonella sp. 0000-0053-5947
Salmonella sp. 0000-0054-8099
Salmonella sp. 0000-0056-2172
Salmonella sp. 0000-0057-9702
Salmonella sp. 0000-0058-2841
Salmonella sp. 0000-0058-2844
Salmonella sp. 0000-0058-2847
Salmonella sp. 0000-0058-2850
Salmonella sp. 0000-0058-2874
Salmonella sp. 0000-0058-2877
Salmonella sp. 0000-0058-2880
Salmonella sp. 0000-0058-2883
Salmonella sp. 0000-0058-2886
Salmonella sp. 0000-0058-2889
Salmonella sp. 0000-0058-2892
Salmonella sp. 0000-0058-2895
Salmonella sp. 0000-0058-4276
Salmonella sp. 0000-0058-7853
Salmonella sp. 0000-0060-5878
Salmonella sp. 0000-0061-1741
Salmonella sp. 0000-0061-6686
Salmonella sp. 0000-0063-2280
Salmonella sp. 0000-0063-4654
Salmonella sp.0000-0060-4438
Salmonella sp.0000-0060-4449
Salmonella sp.0000-0060-4481
Serratia marcescens
Shigella flexneri
Shigella sonnei
Staphylococcus aureus
Staphylococcus epidermidis
Staphylococcus pettenkoferi
Staphylococcus saprophyticus
Stenotrophomonas maltophilia
Streptococcus agalactiae
Yersinia frederiksenii
599.1G BioProject
6 SRP072679 SRA1014928
SRA1060114
SRA1241939
SRA406199
SRA406342
SRA407011
SRA407019
SRA407020
SRA407021
SRA433789
SRA439367
SRA600586
SRA605005
SRA616231
SRA685255
SRA741648
SRA808370
SRA808496
SRA921940
SRA943584
SRA965071
SRA965543
SRA983708
SRA984552
Female Urinary Microbiota Genome Sequencing Other Acinetobacter ursingii
Actinomyces graevenitzii
Actinomyces sp. UMB0918
Actinotignum urinale
Aerococcus sanguinicola
Aerococcus urinae
Aerococcus viridans
Anaerococcus hydrogenalis
Bacillus sp. UMB0899
Bifidobacterium breve
Brachybacterium sp. UMB0905
Brevibacterium luteolum
Brevibacterium paucivorans
Citrobacter freundii
Corynebacterium amycolatum
Corynebacterium aurimucosum
Corynebacterium coyleae
Corynebacterium kroppenstedtii
Corynebacterium tuscaniense
Corynebacterium xerosis
Dolosicoccus paucivorans
Enterococcus faecalis
Escherichia coli
Finegoldia magna
Fusobacterium nucleatum
Gardnerella
Gardnerella sp. 26-12
Gardnerella sp. 30-4
Gardnerella vaginalis
Gemella sanguinis
Gleimia europaea
Gleimia hominis
Haemophilus parainfluenzae
Klebsiella aerogenes
Klebsiella pneumoniae
Lactobacillus crispatus
Lactobacillus gasseri
Lactobacillus iners
Lactobacillus jensenii
Lactobacillus mulieris
Lactobacillus paragasseri
Limosilactobacillus pontis
Microbacterium sp. UMB0228
Micrococcus luteus
Micrococcus lylae
Nosocomiicoccus ampullae
Nosocomiicoccus massiliensis
Oligella urethralis
Peptoniphilus lacrimalis
Prevotella buccalis
Prevotella timonensis
Priestia megaterium
Proteus mirabilis
Pseudoglutamicibacter albus
Pseudomonas aeruginosa
Staphylococcus aureus
Staphylococcus epidermidis
Staphylococcus hominis
Staphylococcus pettenkoferi
Staphylococcus sp. UMB0328
Streptococcus agalactiae
Streptococcus anginosus
Streptococcus mitis
Streptococcus oralis subsp. dentisani
Streptococcus sp. UMB0029
Streptococcus sp. UMB1385
Varibaculum cambriense
Winkia neuii
125.9G BioProject
7 SRP093495 SRA495414
SRA508950
SRA792600
A collection Staphylococci species Genome sequencing Other Macrococcus caseolyticus
Mammaliicoccus fleurettii
Mammaliicoccus lentus
Mammaliicoccus sciuri
Mammaliicoccus stepanovicii
Mammaliicoccus vitulinus
Staphylococcus agnetis
Staphylococcus argensis
Staphylococcus argenteus
Staphylococcus arlettae
Staphylococcus aureus
Staphylococcus auricularis
Staphylococcus capitis subsp. capitis
Staphylococcus capitis subsp. urealyticus
Staphylococcus caprae
Staphylococcus carnosus
Staphylococcus casei
Staphylococcus chromogenes
Staphylococcus coagulans
Staphylococcus cohnii subsp. cohnii
Staphylococcus condimenti
Staphylococcus croceilyticus
Staphylococcus delphini
Staphylococcus devriesei
Staphylococcus epidermidis
Staphylococcus equorum subsp. equorum
Staphylococcus equorum subsp. linens
Staphylococcus felis
Staphylococcus gallinarum
Staphylococcus haemolyticus
Staphylococcus hominis subsp. hominis
Staphylococcus hominis subsp. novobiosepticus
Staphylococcus hyicus
Staphylococcus intermedius NCTC 11048
Staphylococcus kloosii
Staphylococcus lugdunensis
Staphylococcus lutrae
Staphylococcus massiliensis CCUG 55927
Staphylococcus microti
Staphylococcus muscae
Staphylococcus nepalensis
Staphylococcus pasteuri
Staphylococcus petrasii
Staphylococcus pettenkoferi
Staphylococcus piscifermentans
Staphylococcus pragensis
Staphylococcus pseudintermedius
Staphylococcus rostri
Staphylococcus saccharolyticus
Staphylococcus saprophyticus
Staphylococcus schleiferi subsp. schleiferi
Staphylococcus schweitzeri
Staphylococcus simiae
Staphylococcus simulans
Staphylococcus succinus subsp. succinus
Staphylococcus ureilyticus
Staphylococcus warneri
Staphylococcus xylosus
33.1G BioProject
8 SRP315616 SRA1221289 Genome sequencing of 17 Staphylococcus species from middle ear infections Other Staphylococcus aureus
Staphylococcus auricularis
Staphylococcus capitis
Staphylococcus caprae
Staphylococcus epidermidis
Staphylococcus hominis
Staphylococcus pasteuri
Staphylococcus pettenkoferi
Staphylococcus simulans
BioProject
9 SRP316881 SRA1225436
SRA1225820
genomic characterization of the bile bacterial species from cholecystitis patients Other Corynebacterium testudinoris
Enterococcus casseliflavus
Enterococcus faecalis
Escherichia coli
Klebsiella aerogenes
Klebsiella pneumoniae
Ligilactobacillus murinus
Morganella morganii
Paenibacillus lautus
Solibacillus silvestris
Staphylococcus pettenkoferi
unclassified Citrobacter
unclassified Enterococcus
unclassified Lysinibacillus
unclassified Providencia
unclassified Psychrobacter
unclassified Vibrio
BioProject