Search Results ( 27 studies )

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#STUDYSUBMISSIONSTUDY_TITLESTUDY_TYPEORGANISM BASESSUBMITTEDCENTER_NAME
1 DRP001513 DRA001441 Whole genome sequencing of Staphylococcus capitis subsp. capitis, an opportunistic pathogen Whole Genome Sequencing Staphylococcus capitis 1.7G 2014-01-30 GIFU_MED
2 DRP004873 DRA007974 Staphylococcus capitis from a bile sample of a xanthogranulomatous cholecystitis patient Other Staphylococcus capitis 540.5M 2019-01-22 JUNTENDO
3 DRP005417 DRA008143 Comparison of sequencing bias for library preparation kit Other Brachyspira pilosicoli
Escherichia coli O157:H7 str. Sakai
Escherichia coli str. K-12 substr. MG1655
Klebsiella aerogenes
Mammaliicoccus sciuri
Mycobacterium interjectum
Mycobacterium malmoense
Serratia liquefaciens
Staphylococcus aureus MW2
Staphylococcus aureus subsp. aureus N315
Staphylococcus capitis
Staphylococcus caprae
Staphylococcus cohnii
Staphylococcus hominis
Staphylococcus hyicus
Staphylococcus intermedius
Staphylococcus lugdunensis
Staphylococcus pasteuri
Staphylococcus pseudintermedius
Staphylococcus saprophyticus
Staphylococcus schleiferi
Staphylococcus simulans
Staphylococcus warneri
Staphylococcus xylosus
Streptobacillus moniliformis
Tsukamurella pulmonis
synthetic metagenome
95.2G 2019-02-13 KYUSH-MS
4 ERP005928 ERA1098284
ERA1103556
ERA1106625
ERA1116457
ERA1119444
ERA1120512
ERA1123581
ERA1127818
ERA1133795
ERA1138824
ERA1146706
ERA1149161
ERA1154585
ERA1165929
ERA1172104
ERA1179997
ERA1187975
ERA1193295
ERA1209513
ERA1230159
ERA1238334
ERA1245033
ERA1252897
ERA1267446
ERA1269439
ERA1272248
ERA1314259
ERA1332583
ERA1340968
ERA1348695
ERA1350052
ERA1408786
ERA1467170
ERA1485730
ERA1490692
ERA1502191
ERA1510098
ERA1517552
ERA1521369
ERA1526597
ERA1534097
ERA1539392
ERA1748096
ERA1800436
ERA2102798
ERA317479
ERA323265
ERA349384
ERA352179
ERA356875
ERA358084
ERA369205
ERA370035
ERA370892
ERA372375
ERA384459
ERA388435
ERA391800
ERA392766
ERA394909
ERA396055
ERA398061
ERA401040
ERA402071
ERA406006
ERA407429
ERA410947
ERA411695
ERA414337
ERA420035
ERA422319
ERA427384
ERA428793
ERA435002
ERA436824
ERA440004
ERA441519
ERA443121
ERA445443
ERA450059
ERA452562
ERA455415
ERA459643
ERA461270
ERA462814
ERA465247
ERA466459
ERA472339
ERA475244
ERA484782
ERA486630
ERA490832
ERA520661
ERA524506
ERA525887
ERA526659
ERA528927
ERA532391
ERA535257
ERA535838
ERA540674
ERA542367
ERA546307
ERA551699
ERA552098
ERA553589
ERA557791
ERA560726
ERA562148
ERA565051
ERA570425
ERA582788
ERA596673
ERA598441
ERA601841
ERA607527
ERA610037
ERA612411
ERA619194
ERA624588
ERA625460
ERA640046
ERA648767
ERA651416
ERA653335
ERA666322
ERA672288
ERA676170
ERA678388
ERA681828
ERA686816
ERA689257
ERA695319
ERA697652
ERA707453
ERA709434
ERA716401
ERA732791
ERA742458
ERA763746
ERA767150
ERA769182
ERA771509
ERA775503
ERA778271
ERA787520
ERA789720
ERA789953
ERA791926
ERA803094
ERA808777
ERA815606
ERA828195
ERA829918
ERA845654
ERA854069
ERA856274
ERA863103
ERA871183
ERA885395
ERA886780
ERA894252
ERA904256
NCTC_3000 Other Acholeplasma axanthum
Acholeplasma equifetale
Acholeplasma granularum
Acholeplasma hippikon
Acholeplasma laidlawii
Acholeplasma modicum
Acholeplasma oculi
Achromobacter denitrificans
Achromobacter insolitus
Achromobacter marplatensis
Achromobacter piechaudii
Achromobacter ruhlandii
Achromobacter spanius
Achromobacter xylosoxidans
Acidipropionibacterium jensenii
Acidipropionibacterium microaerophilum
Acinetobacter baumannii
Acinetobacter calcoaceticus
Acinetobacter haemolyticus
Acinetobacter johnsonii
Acinetobacter junii
Acinetobacter lwoffii
Actinobacillus capsulatus
Actinobacillus delphinicola
Actinobacillus equuli
Actinobacillus equuli subsp. haemolyticus
Actinobacillus lignieresii
Actinobacillus pleuropneumoniae
Actinobacillus seminis
Actinobacillus suis
Actinobacillus ureae
Actinobaculum suis
Actinomadura madurae
Actinomadura pelletieri
Actinomyces bovis
Actinomyces denticolens
Actinomyces howellii
Actinomyces slackii
Actinomyces viscosus
Aerococcus viridans
Aeromonas caviae
Aeromonas encheleia
Aeromonas hydrophila
Aeromonas salmonicida
Aeromonas sobria
Afipia broomeae
Afipia clevelandensis
Afipia felis
Aggregatibacter actinomycetemcomitans
Aggregatibacter aphrophilus
Aggregatibacter aphrophilus ATCC 33389
Aggregatibacter segnis ATCC 33393
Agrobacterium tumefaciens
Alcaligenes faecalis
Alcaligenes faecalis subsp. faecalis
Algoriella xinjiangensis
Aliarcobacter butzleri
Aliarcobacter cryaerophilus
Aliarcobacter skirrowii
Alloiococcus otitis
Alloprevotella tannerae
Alysiella crassa
Alysiella filiformis
Aminobacter aminovorans
Anaerobiospirillum succiniciproducens
Anaerobiospirillum thomasii
Anaerococcus octavius
Anaerococcus prevotii
Aquaspirillum serpens
Arachnia propionica
Arcanobacterium haemolyticum
Arcobacter nitrofigilis
Atlantibacter hermannii
Atopobium fossor
Avibacterium avium
Avibacterium gallinarum
Avibacterium paragallinarum
Avibacterium volantium
Bacillus badius
Bacillus cereus
Bacillus circulans
Bacillus freudenreichii
Bacillus licheniformis
Bacillus mycoides
Bacillus paralicheniformis
Bacillus pumilus
Bacillus spizizenii
Bacillus subtilis
Bacillus tequilensis
Bacteroides caccae
Bacteroides eggerthii
Bacteroides fragilis
Bacteroides heparinolyticus
Bacteroides ovatus
Bacteroides pyogenes
Bacteroides stercoris
Bacteroides thetaiotaomicron
Bacteroides uniformis
Bartonella doshiae
Bartonella elizabethae
Bartonella grahamii
Bartonella quintana
Bartonella vinsonii
Bartonella washoeensis
Bergeriella denitrificans
Bergeyella zoohelcum
Bibersteinia trehalosi
Bifidobacterium adolescentis
Bifidobacterium bifidum
Bifidobacterium breve
Bifidobacterium dentium
Bifidobacterium longum
Bifidobacterium longum subsp. infantis
Bisgaard Taxon 40
Blautia coccoides
Blautia producta
Bordetella ansorpii
Bordetella avium
Bordetella bronchiseptica
Bordetella hinzii
Bordetella holmesii
Bordetella parapertussis
Bordetella pertussis
Bordetella petrii
Bordetella pseudohinzii
Bordetella trematum
Brachyspira pilosicoli
Brevibacillus brevis
Brevibacillus laterosporus
Brevibacterium casei
Brevibacterium epidermidis
Brevibacterium iodinum
Brevundimonas diminuta
Brevundimonas vancanneytii
Brevundimonas vesicularis
Brucella abortus
Brucella anthropi
Brucella intermedia
Brucella melitensis
Brucella neotomae
Brucella ovis
Brucella suis
Budvicia aquatica
Burkholderia cenocepacia
Burkholderia cepacia
Burkholderia gladioli
Burkholderia mallei
Burkholderia multivorans
Burkholderia oklahomensis
Burkholderia pseudomallei
Burkholderia stabilis
Burkholderia ubonensis
Buttiauxella agrestis
Campylobacter coli
Campylobacter fetus subsp. fetus
Campylobacter fetus subsp. venerealis
Campylobacter gracilis
Campylobacter helveticus
Campylobacter hepaticus
Campylobacter hominis
Campylobacter hyointestinalis
Campylobacter insulaenigrae
Campylobacter jejuni
Campylobacter jejuni subsp. doylei
Campylobacter jejuni subsp. jejuni
Campylobacter lanienae
Campylobacter lari
Campylobacter lari subsp. lari
Campylobacter mucosalis
Campylobacter rectus
Campylobacter sputorum biovar faecalis
Campylobacter sputorum biovar sputorum
Campylobacter sputorum subsp. bubulus
Campylobacter upsaliensis
Campylobacter ureolyticus
Capnocytophaga canimorsus
Capnocytophaga cynodegmi
Capnocytophaga granulosa
Capnocytophaga haemolytica
Capnocytophaga leadbetteri
Capnocytophaga ochracea
Capnocytophaga sp. oral taxon 326
Capnocytophaga sp. oral taxon 412
Capnocytophaga sputigena
Cardiobacterium hominis
Cardiobacterium sp. A
Cardiobacterium valvarum
Carnobacterium divergens
Cedecea davisae
Cedecea lapagei
Cedecea neteri
Cellulomonas biazotea
Cellulomonas fimi
Cellulosimicrobium cellulans
Cellulosimicrobium funkei
Cellulosimicrobium terreum
Chelonobacter oris
Chromobacterium violaceum
Chryseobacterium aquifrigidense
Chryseobacterium balustinum
Chryseobacterium bernardetii
Chryseobacterium carnipullorum
Chryseobacterium gleum
Chryseobacterium haifense
Chryseobacterium indologenes
Chryseobacterium indoltheticum
Chryseobacterium jejuense
Chryseobacterium lactis
Chryseobacterium nakagawai
Chryseobacterium shandongense
Chryseobacterium shigense
Chryseobacterium taihuense
Chryseobacterium taklimakanense
Citrobacter amalonaticus
Citrobacter braakii
Citrobacter freundii
Citrobacter koseri
Citrobacter youngae
Clostridioides difficile
Clostridium baratii
Clostridium beijerinckii
Clostridium botulinum
Clostridium carnis
Clostridium chauvoei
Clostridium cochlearium
Clostridium fallax
Clostridium novyi
Clostridium paraputrificum
Clostridium perfringens
Clostridium perfringens B
Clostridium perfringens NCTC 8239
Clostridium putrefaciens
Clostridium sardiniense
Clostridium sporogenes
Clostridium tertium
Clostridium tetani
Clostridium tetanomorphum
Clostridium ventriculi
Collinsella aerofaciens
Comamonas kerstersii
Comamonas terrigena
Comamonas testosteroni
Corynebacterium amycolatum
Corynebacterium auriscanis
Corynebacterium bovis
Corynebacterium cystitidis
Corynebacterium diphtheriae
Corynebacterium diphtheriae bv. mitis
Corynebacterium imitans
Corynebacterium jeikeium
Corynebacterium kutscheri
Corynebacterium matruchotii
Corynebacterium minutissimum
Corynebacterium mycetoides
Corynebacterium pilosum
Corynebacterium pseudotuberculosis
Corynebacterium renale
Corynebacterium segmentosum
Corynebacterium striatum
Corynebacterium ulcerans
Corynebacterium urealyticum
Corynebacterium xerosis
Cronobacter sakazakii
Cronobacter universalis NCTC 9529
Cutibacterium acnes
Cutibacterium avidum
Cutibacterium granulosum
Cytobacillus firmus
Deinococcus radiophilus
Delftia acidovorans
Dermacoccus nishinomiyaensis
Dermatophilus congolensis
Edwardsiella hoshinae
Edwardsiella ictaluri
Edwardsiella tarda
Eggerthella lenta
Eikenella corrodens
Elizabethkingia anophelis
Elizabethkingia meningoseptica
Elizabethkingia miricola
Empedobacter brevis
Empedobacter falsenii
Enterobacter asburiae
Enterobacter cancerogenus
Enterobacter cloacae
Enterobacter hormaechei
Enterocloster clostridioformis
Enterococcus avium
Enterococcus casseliflavus
Enterococcus cecorum
Enterococcus durans
Enterococcus faecalis
Enterococcus faecium
Enterococcus gallinarum
Enterococcus hirae
Enterococcus malodoratus
Enterococcus mundtii
Enterococcus raffinosus
Enterococcus saccharolyticus
Epilithonimonas bovis
Epilithonimonas pallida
Erysipelatoclostridium ramosum
Erysipelothrix rhusiopathiae
Escherichia coli
Escherichia fergusonii
Escherichia marmotae
Ewingella americana
Exiguobacterium aurantiacum
Faecalicoccus pleomorphus
Fannyhessea vaginae
Filifactor villosus
Finegoldia magna
Flavobacterium filum
Flavobacterium hibernum
Flavobacterium hydatis
Flavobacterium lindanitolerans
Flavobacterium resistens
Fluoribacter bozemanae
Fluoribacter dumoffii
Fluoribacter gormanii
Francisella tularensis subsp. holarctica
Fusobacterium naviforme
Fusobacterium necrogenes
Fusobacterium necrophorum
Fusobacterium necrophorum subsp. necrophorum
Fusobacterium nucleatum
Fusobacterium nucleatum subsp. polymorphum
Fusobacterium nucleatum subsp. vincentii
Fusobacterium ulcerans
Fusobacterium varium
Gallibacterium anatis
Gardnerella vaginalis
Gemella haemolysans
Gemella morbillorum
Glaesserella parasuis
Gordonia bronchialis
Gordonia rubripertincta
Gordonia terrae
Grimontia hollisae
Haemophilus aegyptius
Haemophilus haemoglobinophilus
Haemophilus haemolyticus
Haemophilus influenzae
Haemophilus influenzae-murium
Haemophilus parahaemolyticus
Haemophilus parahaemolyticus HK385
Haemophilus parainfluenzae
Haemophilus parainfluenzae ATCC 33392
Haemophilus paraphrohaemolyticus
Haemophilus pittmaniae
Haemophilus sputorum
Hafnia alvei
Hathewaya histolytica
Helicobacter acinonychis
Helicobacter canadensis
Helicobacter canis
Helicobacter cholecystus
Helicobacter cinaedi
Helicobacter fennelliae
Helicobacter muridarum
Helicobacter mustelae
Helicobacter pametensis
Helicobacter pullorum
Helicobacter pylori
Helicobacter pylori NCTC 11637 = CCUG 17874 = ATCC 43504
Iodobacter fluviatilis
Janthinobacterium lividum
Jonesia denitrificans
Kaistella antarctica
Kaistella anthropi
Kaistella carnis
Kaistella jeonii
Kingella denitrificans
Kingella kingae
Kingella potus
Klebsiella aerogenes
Klebsiella grimontii
Klebsiella michiganensis
Klebsiella oxytoca
Klebsiella pneumoniae
Klebsiella pneumoniae subsp. ozaenae
Klebsiella pneumoniae subsp. pneumoniae
Klebsiella pneumoniae subsp. rhinoscleromatis
Klebsiella quasipneumoniae
Klebsiella sp.
Klebsiella variicola
Kluyvera ascorbata
Kluyvera cryocrescens
Kluyvera intermedia
Kocuria rhizophila
Kocuria rosea
Kocuria varians
Kurthia zopfii
Kytococcus sedentarius
Lacrimispora indolis
Lacrimispora sphenoides
Lacrimispora xylanolytica
Lacticaseibacillus casei
Lacticaseibacillus rhamnosus
Lactiplantibacillus plantarum
Lactiplantibacillus plantarum subsp. plantarum
Lactobacillus acidophilus
Lactobacillus delbrueckii subsp. bulgaricus
Lactobacillus delbrueckii subsp. lactis
Lactobacillus gasseri
Lactococcus lactis subsp. lactis
Latilactobacillus sakei subsp. sakei
Lautropia mirabilis
Leclercia adecarboxylata
Lederbergia lentus
Legionella adelaidensis
Legionella anisa
Legionella beliardensis
Legionella birminghamensis
Legionella brunensis
Legionella busanensis
Legionella cherrii
Legionella cincinnatiensis
Legionella donaldsonii
Legionella dresdenensis
Legionella erythra
Legionella fairfieldensis
Legionella feeleii
Legionella geestiana
Legionella genomosp. 1
Legionella gratiana
Legionella gresilensis
Legionella hackeliae
Legionella israelensis
Legionella jamestowniensis
Legionella jordanis
Legionella lansingensis
Legionella londiniensis
Legionella longbeachae
Legionella maceachernii
Legionella moravica
Legionella nautarum
Legionella oakridgensis
Legionella parisiensis
Legionella pneumophila
Legionella pneumophila subsp. pascullei
Legionella quateirensis
Legionella quinlivanii
Legionella rubrilucens
Legionella sainthelensi
Legionella santicrucis
Legionella shakespearei
Legionella spiritensis
Legionella steigerwaltii
Legionella taurinensis
Legionella wadsworthii
Legionella waltersii
Legionella worsleiensis
Lelliottia amnigena
Leminorella grimontii
Leminorella richardii
Leuconostoc mesenteroides
Levilactobacillus brevis
Listeria booriae
Listeria fleischmannii subsp. coloradonensis
Listeria fleischmannii subsp. fleischmannii
Listeria grayi
Listeria innocua
Listeria ivanovii subsp. ivanovii
Listeria ivanovii subsp. londoniensis
Listeria marthii
Listeria monocytogenes
Listeria newyorkensis
Listeria seeligeri
Listeria welshimeri
Lysinibacillus sphaericus
Macrococcus caseolyticus
Mammaliicoccus fleurettii
Mammaliicoccus lentus
Mammaliicoccus sciuri
Mammaliicoccus stepanovicii
Mannheimia haemolytica
Megamonas hypermegale
Microbacterium oxydans
Micrococcus luteus
Micrococcus luteus NCTC 2665
Micrococcus lylae
Mobiluncus curtisii
Mobiluncus curtisii subsp. curtisii
Mobiluncus holmesii
Mobiluncus mulieris
Moellerella wisconsensis
Moraxella atlantae
Moraxella boevrei
Moraxella bovis
Moraxella caprae
Moraxella catarrhalis
Moraxella caviae
Moraxella cuniculi
Moraxella equi
Moraxella lacunata
Moraxella nonliquefaciens
Moraxella osloensis
Moraxella ovis
Morganella morganii
Morococcus cerebrosus
Muribacter muris
Mycobacterium barrassiae
Mycobacterium celatum
Mycobacterium gordonae
Mycobacterium marinum
Mycobacterium xenopi
Mycobacteroides abscessus
Mycobacteroides chelonae
Mycolicibacter nonchromogenicus
Mycolicibacter terrae
Mycolicibacterium acapulense
Mycolicibacterium aichiense
Mycolicibacterium aurum
Mycolicibacterium chitae
Mycolicibacterium chubuense
Mycolicibacterium duvalii
Mycolicibacterium flavescens
Mycolicibacterium fortuitum
Mycolicibacterium gadium
Mycolicibacterium gilvum
Mycolicibacterium neoaurum
Mycolicibacterium parafortuitum
Mycolicibacterium peregrinum
Mycolicibacterium phlei
Mycolicibacterium rhodesiae
Mycolicibacterium senegalense
Mycolicibacterium smegmatis
Mycolicibacterium thermoresistibile
Mycolicibacterium tokaiense
Mycolicibacterium vaccae
Mycoplasma alkalescens
Mycoplasma anatis
Mycoplasma arginini
Mycoplasma arthritidis
Mycoplasma bovigenitalium
Mycoplasma bovirhinis
Mycoplasma californicum
Mycoplasma canis
Mycoplasma caviae
Mycoplasma citelli
Mycoplasma cloacale
Mycoplasma columbinasale
Mycoplasma columbinum
Mycoplasma columborale
Mycoplasma conjunctivae
Mycoplasma cricetuli
Mycoplasma cynos
Mycoplasma dispar
Mycoplasma edwardii
Mycoplasma equirhinis
Mycoplasma fermentans
Mycoplasma gallinaceum
Mycoplasma gallinarum
Mycoplasma gallisepticum
Mycoplasma gallopavonis
Mycoplasma gateae
Mycoplasma glycophilum
Mycoplasma hyopneumoniae
Mycoplasma hyorhinis
Mycoplasma iguanae
Mycoplasma iowae
Mycoplasma lipofaciens
Mycoplasma maculosum
Mycoplasma meleagridis
Mycoplasma moatsii
Mycoplasma molare
Mycoplasma neurolyticum
Mycoplasma orale
Mycoplasma ovipneumoniae
Mycoplasma phocirhinis
Mycoplasma pneumoniae
Mycoplasma pulmonis
Mycoplasma putrefaciens
Mycoplasma salivarium
Mycoplasma sualvi
Mycoplasma subdolum
Mycoplasma synoviae
Myroides odoratimimus
Myroides odoratus
Neisseria animalis
Neisseria animaloris
Neisseria canis
Neisseria cinerea
Neisseria dentiae
Neisseria elongata
Neisseria elongata subsp. glycolytica
Neisseria elongata subsp. nitroreducens
Neisseria flavescens
Neisseria gonorrhoeae
Neisseria lactamica
Neisseria meningitidis
Neisseria mucosa
Neisseria pharyngis
Neisseria polysaccharea
Neisseria weaveri
Neisseria zoodegmatis
Nocardia africana
Nocardia asteroides
Nocardia brasiliensis
Nocardia cyriacigeorgica
Nocardia farcinica
Nocardia otitidiscaviarum
Nocardiopsis dassonvillei
Odoribacter splanchnicus
Oerskovia turbata
Oligella ureolytica
Oligella urethralis
Paenibacillus alvei
Paenibacillus macerans
Paenibacillus macquariensis
Paenibacillus polymyxa
Paenibacillus thiaminolyticus
Paeniclostridium sordellii
Pandoraea apista
Pandoraea norimbergensis
Pandoraea pnomenusa
Pandoraea pulmonicola
Pandoraea sputorum
Pannonibacter phragmitetus
Pantoea agglomerans
Parabacteroides distasonis
Parabacteroides merdae
Paraclostridium bifermentans
Parascardovia denticolens
Parvimonas micra
Pasteurella bettyae
Pasteurella canis
Pasteurella dagmatis
Pasteurella langaaensis
Pasteurella multocida
Pasteurella multocida subsp. gallicida
Pasteurella multocida subsp. septica
Pasteurella skyensis
Pasteurella stomatis
Pasteurella testudinis
Paucimonas lemoignei
Pediococcus pentosaceus
Peptococcus niger
Peptoniphilus asaccharolyticus
Peptoniphilus harei
Peptoniphilus indolicus
Peptoniphilus ivorii
Peptoniphilus lacrimalis
Peptostreptococcus anaerobius
Peribacillus simplex
Phocaeicola vulgatus
Phocoenobacter uteri
Photobacterium damselae
Plesiomonas shigelloides
Pluralibacter gergoviae
Porphyromonas cangingivalis
Porphyromonas circumdentaria
Porphyromonas crevioricanis
Porphyromonas endodontalis
Porphyromonas gingivalis
Porphyromonas gulae
Porphyromonas macacae
Pragia fontium
Prevotella bivia
Prevotella buccae
Prevotella buccalis
Prevotella corporis
Prevotella denticola
Prevotella disiens
Prevotella intermedia
Prevotella melaninogenica
Prevotella nigrescens
Prevotella oralis
Prevotella oris
Prevotella oulorum
Prevotella pallens
Priestia megaterium
Propionibacterium acidifaciens
Propionibacterium australiense
Propionibacterium freudenreichii
Propionibacterium freudenreichii subsp. shermanii
Propioniferax innocua
Propionimicrobium lymphophilum
Proteus mirabilis
Proteus penneri
Proteus vulgaris
Providencia alcalifaciens
Providencia heimbachae
Providencia rettgeri
Providencia rustigianii
Providencia stuartii
Pseudescherichia vulneris
Pseudoalteromonas nigrifaciens
Pseudomonas aeruginosa
Pseudomonas alcaligenes
Pseudomonas andersonii
Pseudomonas chlororaphis
Pseudomonas chlororaphis subsp. chlororaphis
Pseudomonas fluorescens
Pseudomonas fragi
Pseudomonas guguanensis
Pseudomonas luteola
Pseudomonas mendocina
Pseudomonas mucidolens
Pseudomonas oleovorans
Pseudomonas putida
Pseudomonas stutzeri
Pseudomonas syncyanea
Pseudomonas synxantha
Pseudomonas taetrolens
Psychrobacter phenylpyruvicus
Ralstonia mannitolilytica
Ralstonia pickettii
Raoultella ornithinolytica
Raoultella planticola
Raoultella sp. NCTC 9187
Raoultella terrigena
Rhodococcus coprophilus
Rhodococcus corynebacterioides
Rhodococcus erythropolis
Rhodococcus gordoniae
Rhodococcus hoagii
Rhodococcus rhodochrous
Rhodococcus wratislaviensis
Riemerella anatipestifer
Rikenella microfusus
Rodentibacter pneumotropicus
Romboutsia ilealis
Roseomonas gilardii subsp. rosea
Roseomonas mucosa
Rothia aeria
Rothia dentocariosa
Rothia kristinae
Salmonella bongori
Salmonella enterica
Salmonella enterica subsp. arizonae
Salmonella enterica subsp. diarizonae
Salmonella enterica subsp. enterica
Salmonella enterica subsp. enterica serovar Aberdeen
Salmonella enterica subsp. enterica serovar Bovismorbificans
Salmonella enterica subsp. enterica serovar Braenderup
Salmonella enterica subsp. enterica serovar Bredeney
Salmonella enterica subsp. enterica serovar Choleraesuis
Salmonella enterica subsp. enterica serovar Daytona
Salmonella enterica subsp. enterica serovar Derby
Salmonella enterica subsp. enterica serovar Dublin
Salmonella enterica subsp. enterica serovar Enteritidis
Salmonella enterica subsp. enterica serovar Gallinarum
Salmonella enterica subsp. enterica serovar Give
Salmonella enterica subsp. enterica serovar Goldcoast
Salmonella enterica subsp. enterica serovar Hartford
Salmonella enterica subsp. enterica serovar Havana
Salmonella enterica subsp. enterica serovar Heidelberg
Salmonella enterica subsp. enterica serovar Infantis
Salmonella enterica subsp. enterica serovar Java
Salmonella enterica subsp. enterica serovar Madelia
Salmonella enterica subsp. enterica serovar Montevideo
Salmonella enterica subsp. enterica serovar Oranienburg
Salmonella enterica subsp. enterica serovar Panama
Salmonella enterica subsp. enterica serovar Paratyphi A
Salmonella enterica subsp. enterica serovar Paratyphi C
Salmonella enterica subsp. enterica serovar Poona
Salmonella enterica subsp. enterica serovar Pullorum
Salmonella enterica subsp. enterica serovar Sanjuan
Salmonella enterica subsp. enterica serovar Sendai
Salmonella enterica subsp. enterica serovar Senftenberg
Salmonella enterica subsp. enterica serovar Stanley
Salmonella enterica subsp. enterica serovar Thompson
Salmonella enterica subsp. enterica serovar Typhi
Salmonella enterica subsp. enterica serovar Typhimurium
Salmonella enterica subsp. houtenae
Salmonella enterica subsp. houtenae serovar Houten
Salmonella enterica subsp. indica
Salmonella enterica subsp. salamae
Salmonella enterica subsp. salamae serovar Greenside
Salmonella sp. NCTC 3046
Salmonella sp. NCTC 6947
Salmonella sp. NCTC 7297
Schaalia odontolytica
Sebaldella termitidis
Serratia ficaria
Serratia fonticola
Serratia grimesii
Serratia liquefaciens
Serratia marcescens
Serratia odorifera
Serratia plymuthica
Serratia quinivorans
Serratia rubidaea
Shewanella algae
Shewanella baltica
Shewanella putrefaciens
Shigella boydii
Shigella dysenteriae
Shigella flexneri
Shigella sonnei
Shimwellia blattae
Shinella zoogloeoides
Slackia exigua
Slackia heliotrinireducens
Sphingobacterium composti Yoo et al. 2007 non Ten et al. 2007
Sphingobacterium daejeonense
Sphingobacterium mizutaii
Sphingobacterium multivorum
Sphingobacterium spiritivorum
Sphingobacterium thalpophilum
Sphingomonas paucimobilis
Sporosarcina pasteurii
Staphylococcus agnetis
Staphylococcus argenteus
Staphylococcus arlettae
Staphylococcus aureus
Staphylococcus aureus subsp. aureus NCTC 8325
Staphylococcus auricularis
Staphylococcus capitis
Staphylococcus caprae
Staphylococcus carnosus
Staphylococcus chromogenes
Staphylococcus cohnii
Staphylococcus condimenti
Staphylococcus delphini
Staphylococcus devriesei
Staphylococcus epidermidis
Staphylococcus equorum
Staphylococcus gallinarum
Staphylococcus haemolyticus
Staphylococcus hominis
Staphylococcus hyicus
Staphylococcus intermedius NCTC 11048
Staphylococcus kloosii
Staphylococcus lugdunensis
Staphylococcus massiliensis
Staphylococcus microti
Staphylococcus muscae
Staphylococcus nepalensis
Staphylococcus petrasii
Staphylococcus piscifermentans
Staphylococcus pseudintermedius
Staphylococcus rostri
Staphylococcus saccharolyticus
Staphylococcus saprophyticus
Staphylococcus schleiferi
Staphylococcus schweitzeri
Staphylococcus simiae
Staphylococcus simulans
Staphylococcus warneri
Staphylococcus xylosus
Stenotrophomonas maltophilia
Streptobacillus moniliformis
Streptococcus acidominimus
Streptococcus agalactiae
Streptococcus anginosus
Streptococcus australis
Streptococcus canis
Streptococcus constellatus
Streptococcus constellatus subsp. pharyngis
Streptococcus criceti
Streptococcus cristatus
Streptococcus cristatus ATCC 51100
Streptococcus downei MFe28
Streptococcus dysgalactiae
Streptococcus dysgalactiae subsp. dysgalactiae
Streptococcus dysgalactiae subsp. equisimilis
Streptococcus equi subsp. equi
Streptococcus equi subsp. zooepidemicus
Streptococcus equinus
Streptococcus ferus
Streptococcus gallolyticus
Streptococcus gallolyticus subsp. gallolyticus
Streptococcus gordonii
Streptococcus hyointestinalis
Streptococcus infantarius
Streptococcus infantis
Streptococcus intermedius
Streptococcus lutetiensis
Streptococcus macacae NCTC 11558
Streptococcus massiliensis
Streptococcus merionis
Streptococcus milleri
Streptococcus mitis
Streptococcus mutans
Streptococcus oralis
Streptococcus oralis ATCC 35037
Streptococcus oralis subsp. tigurinus
Streptococcus parasanguinis
Streptococcus pasteurianus
Streptococcus peroris
Streptococcus pneumoniae
Streptococcus porcinus
Streptococcus pseudoporcinus
Streptococcus pyogenes
Streptococcus salivarius
Streptococcus sanguinis
Streptococcus sobrinus
Streptococcus sp. NCTC 10228
Streptococcus sp. NCTC 10233
Streptococcus sp. NCTC 11567
Streptococcus sp. NCTC 5968
Streptococcus suis
Streptococcus thermophilus
Streptococcus uberis
Streptococcus urinalis
Streptococcus vestibularis
Streptococcus viridans
Streptomyces albus
Streptomyces coelicolor A3(2)
Streptomyces griseus
Streptomyces hominis
Streptomyces horton
Streptomyces somaliensis
Suttonella indologenes
Suttonella ornithocola
Tatlockia micdadei
Tatumella ptyseos
Taylorella equigenitalis
Taylorella equigenitalis ATCC 35865
Tissierella praeacuta
Trueperella bialowiezensis
Trueperella pyogenes
Tsukamurella inchonensis
Tsukamurella paurometabola
Tsukamurella pulmonis
Tsukamurella tyrosinosolvens
Urinicoccus massiliensis
Veillonella atypica
Veillonella caviae
Veillonella criceti
Veillonella dispar
Veillonella parvula
Veillonella ratti
Veillonella rodentium
Vibrio alginolyticus
Vibrio anguillarum
Vibrio campbellii
Vibrio cholerae non-O1
Vibrio cincinnatiensis
Vibrio fluvialis
Vibrio furnissii
Vibrio harveyi
Vibrio mediterranei
Vibrio metschnikovii
Vibrio mimicus
Vibrio natriegens
Vibrio owensii
Vibrio parahaemolyticus
Vibrio pelagius
Vibrio vulnificus
Weeksella virosa
Weissella viridescens
Weizmannia coagulans
Wolinella succinogenes
Yersinia enterocolitica
Yersinia enterocolitica subsp. enterocolitica
Yersinia enterocolitica subsp. palearctica
Yersinia frederiksenii
Yersinia intermedia
Yersinia kristensenii
Yersinia pestis
Yersinia pseudotuberculosis
Yersinia ruckeri
Yokenella regensburgei
[Actinobacillus] rossii
[Clostridium] cocleatum
[Clostridium] symbiosum
[Eubacterium] infirmum
[Eubacterium] minutum
[Flavobacterium] thermophilum
[Haemophilus] ducreyi
[Pasteurella] aerogenes
[Pasteurella] mairii
uncultured Avibacterium sp.
4.5T The Wellcome Trust Sanger Institute
5 ERP009637 ERA411565 Staphylococcus capitis NCRS-A's CR03 ,CR04, CR05, CR09 strains sequencing Other Staphylococcus capitis 10M Department of Biosecurity PCL3
6 ERP111634 ERA1632585 Is This Staphylococcal Prosthetic Joint Infection Mono- or Polymicrobial? A Case Report Other Staphylococcus capitis 751.7M STATENS SERUM INSTITUT
7 ERP113963 ERA1767599
ERA1767601
ERA1767602
ERA1767603
ERA1767605
ERA1767606
ERA1767611
ERA1767615
ERA1767616
ERA1767618
ERA1767619
ERA1767621
ERA1767623
ERA1767625
ERA1767627
ERA1767629
ERA1767630
ERA1767631
ERA1767633
ERA1767635
ERA1767638
ERA1767640
ERA1767641
ERA1767642
ERA1767643
ERA1767644
ERA1767645
ERA1767646
ERA1767648
ERA1767650
ERA1767651
ERA1767653
ERA1767655
ERA1767656
ERA1767658
ERA1767659
ERA1767660
ERA1767664
ERA1767665
ERA1767668
ERA1767670
ERA1767672
ERA1767673
ERA1767675
ERA1767677
ERA1767679
ERA1767680
ERA1767683
ERA1767685
ERA1767686
ERA1767688
ERA1767689
ERA1767690
ERA1767692
ERA1767695
ERA1767697
ERA1767698
ERA1767700
ERA1767702
ERA1767703
ERA1767704
ERA1767705
ERA1767706
ERA1767707
ERA1767708
ERA1767710
ERA1767711
ERA1767712
ERA1767713
ERA1767716
ERA1767719
ERA1767720
ERA1767721
ERA1767723
ERA1767725
ERA1767726
ERA1767729
ERA1767730
ERA1767731
ERA1767732
ERA1767734
ERA1767735
ERA1767749
ERA1767750
ERA1767751
ERA1767752
ERA1767753
ERA1767754
ERA1767755
ERA1767756
ERA1767757
ERA1767758
ERA1767759
ERA1767760
ERA1767762
ERA1767763
ERA1767764
ERA1767765
ERA1767766
ERA1767767
ERA1767768
ERA1767769
ERA1767770
ERA1767771
ERA1767772
ERA1767773
ERA1767774
ERA1767775
ERA1767776
ERA1767777
ERA1767778
ERA1767779
ERA1767780
ERA1767781
ERA1767782
ERA1767783
ERA1767784
ERA1767785
ERA1767786
ERA1767787
ERA1767788
ERA1767789
ERA1767790
ERA1767791
ERA1767792
ERA1767793
ERA1767794
ERA1767795
ERA1767796
ERA1767797
ERA1767798
ERA1767799
ERA1767800
ERA1767801
ERA1767802
ERA1767803
ERA1767883
ERA1767892
ERA1767893
ERA1767894
ERA1767895
ERA1767896
ERA1767897
ERA1767923
ERA1767986
ERA1768096
ERA1768097
ERA1768098
ERA1768099
ERA1768100
ERA1768101
ERA1768102
ERA1768103
ERA1768104
ERA1768105
ERA1768106
ERA1768107
ERA1768108
ERA1768109
ERA1768110
ERA1768112
ERA1768113
ERA1768114
ERA1768115
ERA1768116
ERA1768117
ERA1768118
ERA1768119
ERA1768120
ERA1768121
ERA1768123
ERA1768124
ERA1768125
ERA1768126
ERA1768127
ERA1768128
ERA1768130
ERA1768131
ERA1768134
ERA1768135
ERA1768137
ERA1768140
ERA1768141
ERA1768143
ERA1768144
ERA1768145
ERA1768146
ERA1768147
ERA1768148
ERA1768149
ERA1768150
ERA1768151
ERA1768152
ERA1768153
ERA1768154
ERA1768155
ERA1768156
ERA1768157
ERA1768158
ERA1768159
ERA1768160
ERA1768162
ERA1768163
ERA1768165
ERA1768170
ERA1768172
ERA1768174
ERA1768176
ERA1768177
ERA1768179
ERA1768180
ERA1768181
ERA1768183
ERA1768186
ERA1768187
ERA1768188
ERA1768192
ERA1768195
ERA1768196
ERA1768201
ERA1768203
ERA1768208
ERA1768212
ERA1768217
ERA1768218
ERA1768223
ERA1768225
ERA1768229
ERA1768235
ERA1768239
ERA1768243
ERA1768250
ERA1768254
ERA1768261
ERA1768262
ERA1768263
ERA1768267
ERA1768268
ERA1768272
ERA1768273
ERA1768274
ERA1768276
ERA1768281
ERA1768286
ERA1768288
ERA1768289
ERA1768293
ERA1768296
ERA1768297
ERA1768302
ERA1768306
ERA1768307
ERA1768313
ERA1768315
ERA1768317
ERA1768318
ERA1768320
ERA1768323
ERA1768324
ERA1768325
ERA1768329
ERA1768332
ERA1768334
ERA1768337
ERA1768338
ERA1768341
ERA1768345
ERA1768346
ERA1768352
ERA1768354
ERA1768355
ERA1768359
ERA1768360
ERA1768361
ERA1768364
ERA1768366
ERA1768368
ERA1768372
ERA1768375
ERA1768377
ERA1768378
ERA1768383
ERA1768384
ERA1768387
ERA1768390
ERA1768392
ERA1768395
ERA1768398
ERA1768400
ERA1768404
ERA1768405
ERA1768409
ERA1768410
ERA1768413
ERA1768414
ERA1768416
ERA1768417
ERA1768419
ERA1768421
ERA1768423
ERA1768425
ERA1768426
ERA1768429
ERA1768431
ERA1768435
ERA1768437
ERA1768439
ERA1768444
ERA1768448
ERA1768449
ERA1768453
ERA1768456
ERA1768458
ERA1768459
ERA1768464
ERA1768465
ERA1768469
ERA1768473
ERA1768475
ERA1768476
ERA1768484
ERA1768488
ERA1768490
ERA1768494
ERA1768495
ERA1768496
ERA1768497
ERA1768498
ERA1768499
ERA1768500
ERA1768503
ERA1768507
ERA1768508
ERA1768511
ERA1768513
ERA1768515
ERA1768516
ERA1768517
ERA1768518
ERA1768519
ERA1768523
ERA1768527
ERA1768529
ERA1768534
ERA1768535
ERA1768539
ERA1768540
ERA1768543
ERA1768545
ERA1768546
ERA1768547
ERA1768548
ERA1768549
ERA1768550
ERA1768551
ERA1768552
ERA1768553
Non-aureus Staphylococci (CoNS) from clinical and environmental sources Other Mammaliicoccus sciuri
Mammaliicoccus vitulinus
Staphylococcus auricularis
Staphylococcus capitis
Staphylococcus caprae
Staphylococcus chromogenes
Staphylococcus cohnii
Staphylococcus epidermidis
Staphylococcus haemolyticus
Staphylococcus hominis
Staphylococcus lugdunensis
Staphylococcus pasteuri
Staphylococcus saprophyticus
Staphylococcus simulans
Staphylococcus sp. 1
Staphylococcus succinus
Staphylococcus warneri
Staphylococcus xylosus
University of East Anglia
8 ERP115272 ERA2009456
ERA2009457
ERA2009458
ERA2009460
ERA2009461
ERA2009462
ERA2009463
ERA2009464
ERA2009465
ERA2009466
ERA2009467
ERA2009468
ERA2009469
ERA2009470
ERA2009471
ERA2009472
ERA2009473
ERA2009474
ERA2009475
ERA2009476
ERA2009477
ERA2009478
ERA2009479
ERA2009480
ERA2009481
ERA2009482
ERA2009483
ERA2009484
ERA2009485
ERA2009486
ERA2009487
ERA2009488
ERA2009489
ERA2009490
ERA2009491
ERA2009492
ERA2009493
ERA2009503
ERA2009512
ERA2009530
ERA2009539
ERA2009573
ERA2009588
ERA2009599
ERA2009613
ERA2009668
Genomic analysis of Staphylococcus capitis isolated from neonates at a neonatal intensive care unit in Sweden Other Staphylococcus capitis 11.8G Orebro University Hospital
9 ERP121041 ERA2421504
ERA2519775
ERA2582444
One_Day_in_Denmark_2018_point_prevalence_survey Other Acinetobacter baumannii
Acinetobacter bereziniae
Acinetobacter pittii
Actinomyces oris
Actinotignum sp. 1D-1971
Aerococcus sanguinicola
Aerococcus sp. 1D-1724
Aerococcus sp. 1D-463
Aerococcus sp. 1D-488
Aerococcus urinae
Aeromonas caviae
Anaerococcus hydrogenalis
Anaerococcus sp. 1D-1404
Bacterium 1D-1110
Bacterium 1D-500
Bacteroides fragilis
Campylobacter jejuni
Citrobacter amalonaticus
Citrobacter braakii
Citrobacter freundii
Citrobacter koseri
Corynebacterium sp. 1D-1933
Corynebacterium sp. 1D-1935
Corynebacterium sp. 1D-458
Corynebacterium striatum
Cutibacterium acnes
Cutibacterium avidum
Enterobacter bugandensis
Enterobacter cloacae
Enterobacter hormaechei subsp. xiangfangensis
Enterobacter sp. 1D-1140
Enterobacter sp. 1D-1170
Enterobacter sp. 1D-1220
Enterobacter sp. 1D-1306
Enterobacter sp. 1D-573
Enterobacter sp. 1D-589
Enterobacter sp. 1D-616
Enterobacter sp. 1D-649
Enterococcus casseliflavus
Enterococcus faecalis
Enterococcus faecium
Enterococcus gallinarum
Erwinia persicina
Escherichia coli
Finegoldia magna
Fusobacterium necrophorum
Haemophilus influenzae
Halomonas hydrothermalis
Klebsiella aerogenes
Klebsiella oxytoca
Klebsiella pneumoniae
Klebsiella sp. 1D-1084
Klebsiella sp. 1D-1159
Klebsiella sp. 1D-1264
Klebsiella sp. 1D-1275
Klebsiella sp. 1D-1399
Klebsiella sp. 1D-182
Klebsiella sp. 1D-196
Klebsiella sp. 1D-203
Klebsiella sp. 1D-558
Klebsiella sp. 1D-673
Klebsiella sp. 1D-933
Klebsiella sp. 1D-976
Klebsiella sp. 1D-995
Klebsiella variicola
Micrococcus luteus
Moraxella catarrhalis
Morganella morganii
Neisseria gonorrhoeae
Pasteurella canis
Pasteurella dagmatis
Pasteurella multocida
Pasteurella sp. 1D-532
Peptoniphilus harei
Phocaeicola vulgatus
Prevotella baroniae
Propionibacterium sp. 1D-1660
Proteus mirabilis
Proteus vulgaris
Providencia rettgeri
Pseudomonas aeruginosa
Pseudomonas putida
Pseudomonas sp. 1D-967
Raoultella ornithinolytica
Raoultella planticola
Salmonella enterica
Schaalia turicensis
Serratia marcescens
Shigella sonnei
Staphylococcus argenteus
Staphylococcus aureus
Staphylococcus capitis
Staphylococcus cohnii
Staphylococcus epidermidis
Staphylococcus haemolyticus
Staphylococcus hominis
Staphylococcus lugdunensis
Staphylococcus saprophyticus
Staphylococcus warneri
Stenotrophomonas maltophilia
Streptococcus agalactiae
Streptococcus anginosus
Streptococcus constellatus
Streptococcus dysgalactiae
Streptococcus gordonii
Streptococcus mitis
Streptococcus oralis
Streptococcus pneumoniae
Streptococcus pseudopneumoniae
Streptococcus pyogenes
Streptococcus sp. 1D-1870
Streptococcus sp. 1D-1961
Streptococcus sp. 1D-394
Yersinia enterocolitica
Centre for Genomic Epidemiology, National Food Institute, Technical University of Denmark (DTU), Denmark
10 SRP040661 SRA1058331
SRA1061013
SRA1088670
SRA1143220
SRA1150214
SRA1166121
SRA1194008
SRA149653
SRA550379
SRA704414
SRA795518
SRA807371
SRA880406
SRA889218
SRA891459
SRA916219
SRA949279
FDA-ARGOS is a database with public quality-controlled reference genomes for diagnostic use and regulatory science Other Abiotrophia defectiva
Achromobacter deleyi
Achromobacter denitrificans
Achromobacter insolitus
Achromobacter pestifer
Achromobacter xylosoxidans
Acinetobacter baumannii
Acinetobacter calcoaceticus
Acinetobacter haemolyticus
Acinetobacter johnsonii
Acinetobacter lwoffii
Acinetobacter nosocomialis
Acinetobacter pittii
Acinetobacter radioresistens
Acinetobacter sp. FDAARGOS_131
Acinetobacter sp. FDAARGOS_493
Acinetobacter sp. FDAARGOS_494
Acinetobacter sp. FDAARGOS_495
Acinetobacter sp. FDAARGOS_515
Acinetobacter sp. FDAARGOS_541
Acinetobacter sp. FDAARGOS_558
Acinetobacter sp. FDAARGOS_559
Acinetobacter sp. FDAARGOS_560
Acinetobacter sp. FDAARGOS_724
Acinetobacter ursingii
Actinomyces naeslundii
Actinomyces oris
Aerococcus urinae
Aerococcus viridans
Aeromonas allosaccharophila
Aeromonas caviae
Aeromonas hydrophila
Aeromonas jandaei
Aeromonas veronii
Aggregatibacter actinomycetemcomitans
Aggregatibacter aphrophilus
Aggregatibacter segnis
Agrobacterium sp. FDAARGOS_525
Agrobacterium tumefaciens
Alcaligenes faecalis
Amycolatopsis sp. FDAARGOS 1241
Anaerococcus vaginalis
Arachnia propionica
Argentinian mammarenavirus
Aspergillus niger
Atlantibacter hermannii
Bacillus anthracis
Bacillus cereus
Bacillus circulans
Bacillus licheniformis
Bacillus mycoides
Bacillus sp. (in: Bacteria)
Bacillus sp. FDAARGOS_235
Bacillus subtilis
Bacillus thuringiensis
Bacillus tropicus
Bacteroides caccae
Bacteroides cellulosilyticus
Bacteroides eggerthii
Bacteroides fragilis
Bacteroides ovatus
Bacteroides sp FDAARGOS 1223
Bacteroides sp FDAARGOS 1224
Bacteroides thetaiotaomicron
Bacteroides uniformis
Bartonella bacilliformis
Bartonella henselae str. Houston-1
Bifidobacterium breve
Bordetella bronchiseptica
Bordetella hinzii
Bordetella parapertussis
Bordetella pertussis
Bordetella pertussis 18323
Borreliella burgdorferi
Brevibacterium casei
Brevundimonas diminuta
Brevundimonas vesicularis
Brucella anthropi
Brucella canis
Budvicia aquatica
Bundibugyo ebolavirus
Burkholderia ambifaria
Burkholderia cenocepacia
Burkholderia cepacia
Burkholderia dolosa
Burkholderia gladioli
Burkholderia gladioli pv. gladioli
Burkholderia glumae
Burkholderia humptydooensis
Burkholderia mallei
Burkholderia multivorans
Burkholderia oklahomensis
Burkholderia plantarii
Burkholderia pseudomallei
Burkholderia thailandensis
Burkholderia vietnamiensis
Butyricimonas virosa
Campylobacter coli
Campylobacter jejuni
Campylobacter jejuni subsp. doylei
Campylobacter lari
Campylobacter upsaliensis
Campylobacter ureolyticus
Candida albicans
Candida parapsilosis
Capnocytophaga sp. FDAARGOS_737
Cedecea neteri
Cedecea sp. FDAARGOS_727
Chapare mammarenavirus
Chikungunya virus
Chromobacterium violaceum
Chryseobacterium arthrosphaerae
Chryseobacterium gleum
Chryseobacterium indologenes
Chryseobacterium sp. FDAARGOS 1104
Citrobacter amalonaticus
Citrobacter braakii
Citrobacter freundii
Citrobacter koseri
Citrobacter portucalensis
Citrobacter sp.
Citrobacter werkmanii
Clavispora lusitaniae
Clostridioides difficile
Clostridium perfringens
Clostridium sporogenes
Comamonas terrigena
Coprococcus comes
Corynebacterium amycolatum
Corynebacterium aurimucosum
Corynebacterium bovis
Corynebacterium diphtheriae
Corynebacterium glucuronolyticum
Corynebacterium jeikeium
Corynebacterium kroppenstedtii
Corynebacterium macginleyi
Corynebacterium minutissimum
Corynebacterium propinquum
Corynebacterium riegelii
Corynebacterium sp. FDAARGOS 1242
Corynebacterium striatum
Corynebacterium tuberculostearicum
Corynebacterium ulcerans
Corynebacterium urealyticum
Corynebacterium xerosis
Crimean-Congo hemorrhagic fever orthonairovirus
Cronobacter sakazakii
Cupriavidus gilardii
Cupriavidus metallidurans
Cupriavidus necator
Cupriavidus pauculus
Cutibacterium acnes
Delftia acidovorans
Delftia lacustris
Dengue virus
Dermabacter hominis
Dermacoccus nishinomiyaensis
Eastern equine encephalitis virus
Edwardsiella hoshinae
Edwardsiella tarda
Elizabethkingia anophelis
Elizabethkingia meningoseptica
Elizabethkingia miricola
Enterobacter asburiae
Enterobacter cancerogenus
Enterobacter cloacae
Enterobacter cloacae complex sp.
Enterobacter hormaechei
Enterobacter roggenkampii
Enterocloster bolteae
Enterocloster clostridioformis
Enterococcus avium
Enterococcus casseliflavus
Enterococcus durans
Enterococcus faecalis
Enterococcus faecium
Enterococcus gallinarum
Enterococcus hirae
Enterococcus sp. FDAARGOS_163
Enterococcus sp. FDAARGOS_375
Enterococcus sp. FDAARGOS_553
Erysipelatoclostridium ramosum
Escherichia coli
Escherichia coli O104:H4
Escherichia fergusonii
Fannyhessea vaginae
Finegoldia magna
Francisella tularensis
Fusobacterium canifelinum
Fusobacterium necrophorum
Gardnerella vaginalis
Gemella haemolysans
Gemella morbillorum
Gemella sanguinis
Gordonia bronchialis
Grimontia hollisae
Guanarito mammarenavirus
Haemophilus influenzae
Haemophilus parahaemolyticus
Haemophilus parainfluenzae
Hafnia alvei
Hafnia paralvei
Helicobacter pylori
Hendra henipavirus
Jonesia denitrificans
Kingella denitrificans
Klebsiella aerogenes
Klebsiella michiganensis
Klebsiella oxytoca
Klebsiella pneumoniae
Klebsiella quasipneumoniae
Klebsiella sp. FDAARGOS_511
Klebsiella variicola
Kocuria rhizophila
Kytococcus sedentarius
Lacrimispora saccharolytica
Lactobacillus crispatus
Lactobacillus jensenii
Lactococcus garvieae
Lactococcus lactis
Lassa mammarenavirus
Leclercia adecarboxylata
Legionella anisa
Legionella longbeachae
Legionella pneumophila
Legionella pneumophila subsp. pneumophila
Leishmania donovani
Lelliottia amnigena
Leptospira interrogans serovar Copenhageni
Leuconostoc falkenbergense
Leuconostoc mesenteroides
Leuconostoc pseudomesenteroides
Listeria innocua
Listeria monocytogenes
Listeria welshimeri
Lysinibacillus macroides
Machupo mammarenavirus
Macrococcus caseolyticus
Mammaliicoccus fleurettii
Mammaliicoccus sciuri
Mammaliicoccus vitulinus
Marburg marburgvirus
Micrococcus luteus
Micrococcus sp. FDAARGOS_333
Middle East respiratory syndrome-related coronavirus
Mobiluncus curtisii
Mobiluncus mulieris
Monkeypox virus
Moraxella catarrhalis
Moraxella nonliquefaciens
Moraxella osloensis
Morganella morganii
Mycobacterium avium subsp. paratuberculosis
Mycobacterium tuberculosis
Mycobacteroides abscessus
Mycolicibacterium smegmatis
Myroides odoratus
Neisseria cinerea
Neisseria gonorrhoeae
Neisseria meningitidis
Neisseria mucosa
Neisseria sicca
Nipah henipavirus
Nocardia brasiliensis
Nocardia sp. FDAARGOS_372
Oligella ureolytica
Oligella urethralis
Pantoea agglomerans
Pantoea ananatis
Pantoea sp. FDAARGOS_194
Parabacteroides distasonis
Paraburkholderia fungorum
Paraburkholderia ginsengisoli
Paracoccus yeei
Parvimonas micra
Pasteurella multocida
Pediococcus acidilactici
Pediococcus pentosaceus
Peptoniphilus asaccharolyticus
Peptoniphilus harei
Peribacillus psychrosaccharolyticus
Phocaeicola coprophilus
Phocaeicola vulgatus
Plesiomonas shigelloides
Pluralibacter gergoviae
Prevotella melaninogenica
Propionibacterium acidifaciens
Proteus mirabilis
Proteus penneri
Proteus vulgaris
Providencia alcalifaciens
Providencia rettgeri
Providencia stuartii
Pseudomonas aeruginosa
Pseudomonas balearica
Pseudomonas fluorescens
Pseudomonas fulva
Pseudomonas luteola
Pseudomonas monteilii
Pseudomonas oryzihabitans
Pseudomonas protegens
Pseudomonas putida
Pseudomonas sp. FDAARGOS_380
Pseudomonas sp. FDAARGOS_761
Pseudomonas stutzeri
Psychrobacter cryohalolentis
Psychrobacter sp. FDAARGOS_221
Ralstonia pickettii
Raoultella ornithinolytica
Raoultella planticola
Reston ebolavirus
Rhizobium pusense
Rhodanobacter sp. FDAARGOS 1247
Rhodococcus hoagii
Rift Valley fever virus
Roseobacter denitrificans
Roseomonas gilardii
Roseomonas sp. FDAARGOS_362
Ross River virus
Rothia aeria
Rothia dentocariosa
Rothia kristinae
Rothia mucilaginosa
Saccharomyces cerevisiae
Salmonella enterica
Salmonella enterica subsp. enterica serovar Bredeney
Salmonella enterica subsp. enterica serovar Hadar
Salmonella enterica subsp. enterica serovar Heidelberg
Salmonella enterica subsp. enterica serovar Infantis
Salmonella enterica subsp. enterica serovar Ohio
Salmonella enterica subsp. enterica serovar Paratyphi A
Salmonella enterica subsp. enterica serovar Saintpaul
Salmonella enterica subsp. enterica serovar Typhimurium
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-
Salmonella enterica subsp. houtenae
Schaalia meyeri
Schaalia odontolytica
Serratia fonticola
Serratia liquefaciens
Serratia marcescens
Serratia odorifera
Serratia plymuthica
Serratia rubidaea
Serratia sp. FDAARGOS_506
Serratia ureilytica
Severe acute respiratory syndrome coronavirus 2
Shewanella putrefaciens
Shewanella sp. FDAARGOS_354
Shigella boydii
Shigella flexneri
Shigella sonnei
Sphingobacterium multivorum
Sphingobacterium spiritivorum
Sphingomonas paucimobilis
Staphylococcus aureus
Staphylococcus auricularis
Staphylococcus capitis
Staphylococcus carnosus
Staphylococcus cohnii
Staphylococcus condimenti
Staphylococcus epidermidis
Staphylococcus equorum
Staphylococcus felis
Staphylococcus haemolyticus
Staphylococcus hominis
Staphylococcus lugdunensis
Staphylococcus pasteuri
Staphylococcus pettenkoferi
Staphylococcus pseudintermedius
Staphylococcus saccharolyticus
Staphylococcus saprophyticus
Staphylococcus simulans
Staphylococcus sp. FDAARGOS_39
Staphylococcus warneri
Stenotrophomonas maltophilia
Streptobacillus moniliformis
Streptococcus agalactiae
Streptococcus anginosus
Streptococcus constellatus
Streptococcus dysgalactiae
Streptococcus equinus
Streptococcus gallolyticus
Streptococcus gordonii
Streptococcus infantarius
Streptococcus intermedius
Streptococcus lutetiensis
Streptococcus mitis
Streptococcus mutans
Streptococcus oralis
Streptococcus pyogenes
Streptococcus salivarius
Streptococcus sanguinis
Streptococcus sp. 'group B'
Streptococcus sp. FDAARGOS_146
Streptococcus sp. FDAARGOS_192
Streptococcus sp. FDAARGOS_256
Streptococcus sp. FDAARGOS_520
Streptococcus sp. FDAARGOS_521
Streptococcus sp. FDAARGOS_522
Streptomyces californicus
Sudan ebolavirus
Sutterella wadsworthensis
Tai Forest ebolavirus
Veillonella parvula
Venezuelan equine encephalitis virus
Vibrio alginolyticus
Vibrio cholerae
Vibrio diabolicus
Vibrio fluvialis
Vibrio furnissii
Vibrio harveyi
Vibrio mimicus
Vibrio parahaemolyticus
Vibrio vulnificus
Weissella paramesenteroides
Weizmannia coagulans
West Nile virus
Yellow fever virus
Yersinia enterocolitica
Yersinia frederiksenii
Yersinia intermedia
Yersinia kristensenii
Yersinia pestis
Yersinia pseudotuberculosis
Yersinia sp. FDAARGOS_228
Zaire ebolavirus
Zika virus
[Clostridium] scindens
[Haemophilus] ducreyi
[Ruminococcus] gnavus
5.3T BioProject
11 SRP049998 SRA201934 Bacterial isolates from intensive care units Other Achromobacter xylosoxidans
Acinetobacter baumannii
Acinetobacter bereziniae
Acinetobacter nosocomialis
Acinetobacter pittii
Acinetobacter seifertii
Acinetobacter sp. 243_ASPC
Acinetobacter ursingii
Actinomyces urogenitalis
Aeromonas hydrophila
Aggregatibacter segnis
Alloscardovia omnicolens
Arcanobacterium haemolyticum
Bacillus cereus
Bacillus sp. 220_BSPC
Bacillus sp. 445_BSPC
Bacillus sp. 522_BSPC
Bacillus subtilis subsp. subtilis
Bacteroides fragilis
Bacteroides thetaiotaomicron
Bifidobacterium scardovii
Burkholderia cenocepacia
Burkholderia cepacia
Burkholderia multivorans
Capnocytophaga ochracea
Cardiobacterium hominis
Carnobacterium maltaromaticum
Carnobacterium sp. 1290_CSPC
Cellulomonas flavigena
Citrobacter braakii
Citrobacter freundii
Citrobacter koseri
Clostridium botulinum
Clostridium perfringens
Clostridium sporogenes
Corynebacterium aurimucosum
Corynebacterium falsenii
Corynebacterium halotolerans
Corynebacterium jeikeium
Corynebacterium propinquum
Corynebacterium sp. 212_CJEI
Corynebacterium sp. 401_CJEI
Corynebacterium sp. 805_CJEI
Corynebacterium striatum
Corynebacterium urealyticum
Corynebacterium vitaeruminis
Cutibacterium acnes
Cutibacterium avidum
Eikenella corrodens
Enterobacter asburiae
Enterobacter bugandensis
Enterobacter cloacae
Enterobacter hormaechei
Enterobacter hormaechei subsp. hoffmannii
Enterobacter hormaechei subsp. oharae
Enterobacter hormaechei subsp. steigerwaltii
Enterobacter kobei
Enterobacter ludwigii
Enterobacter roggenkampii
Enterobacter sp. 940_PEND
Enterococcus avium
Enterococcus faecalis
Enterococcus faecium
Enterococcus hirae
Enterococcus sp. 1140_ESPC
Enterococcus sp. 255_ESPC
Escherichia coli
Franconibacter helveticus
Gemella sanguinis
Haemophilus influenzae
Haemophilus parainfluenzae
Hafnia paralvei
Isoptericola variabilis
Klebsiella aerogenes
Klebsiella michiganensis
Klebsiella oxytoca
Klebsiella pneumoniae
Klebsiella pneumoniae subsp. ozaenae
Klebsiella pneumoniae subsp. pneumoniae
Klebsiella quasipneumoniae subsp. quasipneumoniae
Klebsiella quasipneumoniae subsp. similipneumoniae
Klebsiella variicola
Kytococcus sedentarius
Lacticaseibacillus casei
Lacticaseibacillus paracasei
Lacticaseibacillus rhamnosus
Lactobacillus gasseri
Leifsonia xyli
Leuconostoc citreum
Ligilactobacillus salivarius
Limosilactobacillus fermentum
Micrococcus luteus
Moraxella canis
Moraxella catarrhalis
Morganella morganii
Morococcus cerebrosus
Mycoplasma hominis
Naumovozyma dairenensis
Neisseria bacilliformis
Neisseria elongata subsp. glycolytica
Neisseria lactamica
Neisseria meningitidis
Oligella urethralis
Pantoea vagans
Pasteurella multocida
Prevotella bivia
Prevotella buccae
Prevotella denticola
Proteus mirabilis
Pseudomonas aeruginosa
Pseudomonas denitrificans (nom. rej.)
Pseudomonas putida
Pseudomonas stutzeri
Ralstonia solanacearum
Raoultella ornithinolytica
Raoultella planticola
Rothia dentocariosa
Rothia mucilaginosa
Sanguibacter keddieii
Serratia liquefaciens
Serratia marcescens
Serratia sp. 506_PEND
Shigella boydii
Shigella dysenteriae
Shigella sonnei
Staphylococcus argenteus
Staphylococcus aureus
Staphylococcus capitis
Staphylococcus epidermidis
Staphylococcus haemolyticus
Staphylococcus hominis
Staphylococcus pasteuri
Staphylococcus pettenkoferi
Staphylococcus saprophyticus
Staphylococcus warneri
Stenotrophomonas maltophilia
Streptococcus agalactiae
Streptococcus anginosus
Streptococcus constellatus
Streptococcus cristatus
Streptococcus dysgalactiae
Streptococcus gordonii
Streptococcus intermedius
Streptococcus mitis
Streptococcus mutans
Streptococcus oralis
Streptococcus parasanguinis
Streptococcus pasteurianus
Streptococcus pneumoniae
Streptococcus pseudopneumoniae
Streptococcus pyogenes
Streptococcus salivarius
Streptococcus sanguinis
Streptococcus sp. 1004_SSPC
Streptococcus sp. 1171_SSPC
Streptococcus sp. 263_SSPC
Streptococcus sp. 343_SSPC
Streptococcus sp. 400_SSPC
Streptococcus sp. 449_SSPC
Streptococcus thermophilus
Streptomyces cattleya
Trueperella pyogenes
Xylanimonas cellulosilytica
Yarrowia lipolytica
139.8G BioProject
12 SRP069765 SRA349974
SRA350002
SRA350003
SRA350004
SRA350005
SRA350025
SRA350027
SRA350028
SRA350051
Genome sequencing of Staphylcoccus spp. isolates Other Mammaliicoccus lentus
Staphylococcus capitis
Staphylococcus cohnii
Staphylococcus epidermidis
Staphylococcus saprophyticus
2.2G BioProject
13 SRP073146 SRA409498 Staphylococcus capitis strain:H65 Genome sequencing and assembly Whole Genome Sequencing Staphylococcus capitis 425.9M BioProject
14 SRP073165 SRA409722 Staphylococcus capitis strain:H36 Genome sequencing and assembly Whole Genome Sequencing Staphylococcus capitis 626.2M BioProject
15 SRP158642 SRA762446 Multi-resistant Staphylococcus capitis as a globally disseminated neonatal pathogen Other Staphylococcus capitis 31.4G BioProject
16 SRP159200 SRA764895 Skin bacteria individual sequencing Other Acinetobacter johnsonii
Acinetobacter lwoffii
Corynebacterium jeikeium
Corynebacterium urealyticum DSM 7109
Cutibacterium acnes
Moraxella osloensis
Pseudomonas aeruginosa
Staphylococcus aureus
Staphylococcus capitis
Staphylococcus epidermidis
Staphylococcus haemolyticus
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 = NCTC 7292
Staphylococcus xylosus
Streptococcus mitis
Streptococcus pyogenes
5.4G BioProject
17 SRP162824 SRA786436
SRA865972
SRA865976
Evolution history and large-scale phylogeography of the multiresistant, neonatal sepsis-associated Staphylococcus capitis clone NRCS-A Whole Genome Sequencing Staphylococcus capitis 95.1G BioProject
18 SRP170911 SRA815174 Genome sequencing of multi-drug resistant Staphylococci Other Staphylococcus capitis
Staphylococcus haemolyticus
765.1M BioProject
19 SRP241882 SRA1025994 RNA sequencing of S. simiae CCM 7213T, S. capitis SK14 and S. epidermidis RP62A strains Other Staphylococcus capitis
Staphylococcus epidermidis RP62A
Staphylococcus simiae
35.2G GEO
20 SRP273938 SRA1104651 Draft genome sequences of four commensal strains of Staphylococcus and Pseudomonas isolated from human skin Other Pseudomonas fluorescens
Staphylococcus aureus
Staphylococcus capitis
Staphylococcus epidermidis
1G BioProject