Search Results ( 32 studies )

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#STUDYSUBMISSIONSTUDY_TITLESTUDY_TYPEORGANISM BASESSUBMITTEDCENTER_NAME
1 DRP000390 DRA000384 Construction of a rye (Secale cereale L.) reference transcriptome Transcriptome Analysis Secale cereale 3G 2011-05-04 AAFC_CAN
2 ERP000274 ERA011227 GABI-RYE EXPRESS: Unlocking the genetic potential of rye by establishing a functional genomics resource for the EXPRESSed portion of the rye genome Transcriptome Analysis Secale cereale 652.6M TUM_Plant_Breeding
3 ERP001061 ERA073422 The selfish B chromosome of rye evolved as a mosaic of multiple A chromosome and organelle derived sequences Other Secale cereale 2.9G IPK-Gatersleben
4 ERP001745 ERA156315 Whole genome shotgun survey sequencing of sorted Rye Chromosomes Whole Genome Sequencing Secale cereale 10.3G IPK-Gatersleben
5 ERP005690 ERA305049
ERA305050
Next Generation Sequencing of Rye line Lo7 Other Secale cereale 571.5G Leibniz Institute of Plant Genetics and Crop Plant Research
6 ERP005691 ERA304165 Next Generation Sequencing of 10 rye line and one Secale vavilovii accession Other Secale cereale
Secale cereale subsp. vavilovii
1.3T Leibniz Institute of Plant Genetics and Crop Plant Research
7 ERP014009 ERA562320
ERA562323
Seeds of a rye (Secale cereale L.) self-fertile inbred line 7415 with and without Bs were grown under long-day conditions (16 h light, 22°C day/16°C night), and all experimental materials from different tissues were collected during this period. Illumina paired-end RNAseq reads obtained from generative (anther) and vegetative (root and leave) tissues with (4B) and without (0B) B chromosomes. Other Secale cereale 98.9G Leibniz Institute of Plant Genetics and Crop Plant Research
8 ERP104381 ERA1098273 GBS data of 101 accessions of domesticated rye, S. vavilovii, S. strictum and S. sylvestre. Other Secale cereale
Secale cereale subsp. afghanicum
Secale cereale subsp. ancestrale
Secale cereale subsp. dighoricum
Secale cereale subsp. segetale
Secale cereale subsp. vavilovii
Secale strictum subsp. anatolicum
Secale strictum subsp. kuprijanovii
Secale strictum subsp. strictum
Secale sylvestre
66.2G Leibniz Institute of Plant Genetics and Crop Plant Research
9 ERP107519 ERA1246617 Transcriptome analysis of early meiosis in wheat in the presence and absence of the Ph1 locus Other Secale cereale
Secale cereale x Triticum aestivum
Triticum aestivum
hybrid
403.3G The Genome Analysis Centre
10 ERP115274 ERA1898911 Secale cereale Lo7 assembly - Hi-C raw data Other Secale cereale Leibniz Institute of Plant Genetics and Crop Plant Research
11 ERP115287 ERA1899262 Secale cereale Lo7 assembly - CCS data Other Secale cereale Leibniz Institute of Plant Genetics and Crop Plant Research
12 ERP115339 ERA1903491 Secale cereale Lo7 assembly - MP and PE data for assembly Other Secale cereale Leibniz Institute of Plant Genetics and Crop Plant Research
13 ERP117345 ERA2123531 Secale cereale Lo7 assembly - 10X data Other Secale cereale Leibniz Institute of Plant Genetics and Crop Plant Research
14 ERP117559 ERA2153758 Secale cereale Lo7 assembly - additional Hi-C raw data Other Secale cereale
Secale strictum
Leibniz Institute of Plant Genetics and Crop Plant Research
15 ERP118428 ERA2291065 Secale cereale Lo7 - GBS data Other Secale cereale
Secale cereale subsp. rigidum
Secale cereale subsp. vavilovii
Secale strictum
Secale strictum subsp. africanum
Secale strictum subsp. anatolicum
Secale strictum subsp. kuprijanovii
Secale strictum subsp. strictum
Leibniz Institute of Plant Genetics and Crop Plant Research
16 ERP118508 ERA2296479
ERA2296481
ERA2296590
ERA2296593
ERA2296597
ERA2296599
ERA2296600
ERA2296601
Secale cereale L. inbred line 'Lo7' genome assembly paper Rabanus-Wallace et. al Other Secale cereale 139.7G EI
17 SRP002378 SRA012605 Sequence composition and gene content of rye 1RS Whole Genome Sequencing Secale cereale 245.4M 2010-04-28 Austrian Institute of Technology
18 SRP059312 SRA271608 axiom 820K array Triticum aestivum Other Aegilops markgrafii
Aegilops peregrina
Aegilops speltoides
Aegilops tauschii
Amblyopyrum muticum
Secale cereale
Thinopyrum bessarabicum
Thinopyrum elongatum
Thinopyrum intermedium
Thinopyrum obtusiflorum
Triticum aestivum
Triticum dicoccoides
Triticum timopheevii
Triticum urartu
120.6G BioProject
19 SRP091705 SRA485492 RNA seq Other Secale cereale 28.5G BioProject
20 SRP100968 SRA541954 Analysis of mutations disrupting the formation of the wax layer in rye, and assessment of their impact on morphological, biochemical and physiological traits Other Secale cereale 152.9G BioProject