Search Results ( 24 studies )

/ 2
#STUDYSUBMISSIONSTUDY_TITLESTUDY_TYPEORGANISM BASESSUBMITTEDCENTER_NAME
1 ERP000192 ERA010769
ERA012027
ERA013846
ERA014205
ERA015972
ERA016233
ERA062406
ERA080986
ERA119038
ERA123483
ERA135578
ERA137397
ERA140007
ERA146112
ERA194341
ERA195399
ERA199160
ERA279241
ERA302519
ERA885648
ERA885649
ERA893186
ERA893619
ERA893620
ERA893650
ERA893651
ERA893666
ERA893667
Discovery of sequence diversity in Mycobacterium tuberculosis (Russia collection) Whole Genome Sequencing Mycobacterium tuberculosis
Mycobacterium tuberculosis H37Rv
Mycobacterium tuberculosis variant africanum
Mycobacterium tuberculosis variant bovis
human gut metagenome
778.7G The Wellcome Trust Sanger Institute
2 ERP000214 ERA007728 Mycobacterium africanum genome sequencing Whole Genome Sequencing Mycobacterium tuberculosis variant africanum 212.9M SC
3 ERP003279 ERA252272
ERA267448
ERA269039
ERA279264
ERA291800
ERA294550
ERA302540
ERA428792
ERA429803
ERA429809
ERA525908
ERA607512
Global_and_local_genomics_of_Mycobacterium_ulcerans Whole Genome Sequencing Mycobacterium liflandii
Mycobacterium marinum
Mycobacterium tuberculosis variant africanum
Mycobacterium ulcerans
246.1G The Wellcome Trust Sanger Institute
4 ERP004216 ERA287832
ERA294554
ERA309977
ERA313850
ERA394897
ERA407416
ERA428763
ERA445380
ERA486602
ERA525912
ERA552052
ERA553499
ERA587826
Genomics_of_Mycobacterium_africanum_on_the_global_and_local_scale Whole Genome Sequencing Mycobacterium tuberculosis complex
Mycobacterium tuberculosis variant africanum
241.6G SC
5 ERP010057 ERA1120648
ERA425881
ERA425883
Genomic evidence for lineage-specific adaptation in Mycobacterium tuberculosis Other Mycobacterium tuberculosis
Mycobacterium tuberculosis complex sp.
Mycobacterium tuberculosis variant africanum
89.3G Swiss Tropical and Public Health Institute, Switzerland
6 ERP017693 ERA731013 Whole-genome sequencing illuminates the evolution and spread of multidrug-resistant tuberculosis in Southwest Nigeria Other Mycobacterium tuberculosis
Mycobacterium tuberculosis variant africanum
6.2G BIRMINGHAM UNIVERSITY
7 ERP104914 ERA1120650 Maf diversity in Ghana Other Mycobacterium tuberculosis variant africanum 432M
8 ERP107428 ERA1244780
ERA1549149
Genomic diversity in Mycobacterium Lineage 5 Other Mycobacterium tuberculosis variant africanum 16.5G DST/NRF Centre of Excellence for Biomedical TB research, SAMRC Centre for TB Research
9 ERP109524 ERA1523356 The rise of virulent genotypes and an emerging threat of multidrug resistant tuberculosis in Bamako, Mali Other Mycobacterium tuberculosis
Mycobacterium tuberculosis variant africanum
11.4G BIRMINGHAM UNIVERSITY
10 ERP118219 ERA2200309 Publicly available whole-genome sequencing data supports TB surveillance Other Mycobacterium tuberculosis
Mycobacterium tuberculosis variant africanum
87.5G ROBERT-KOCH INSTITUTE
11 ERP119211 ERA2335993
ERA2336779
ERA2336781
ERA2336784
ERA2336785
ERA2336786
ERA2336788
ERA2336789
ERA2336791
ERA2336803
ERA2336820
ERA2336821
ERA2336824
ERA2336826
ERA2336827
ERA2336828
ERA2336829
ERA2336830
ERA2336831
ERA2336834
ERA2336835
ERA2336836
ERA2336840
ERA2336841
ERA2336842
ERA2336843
ERA2336844
ERA2336846
ERA2336847
ERA2336848
ERA2336851
ERA2336852
ERA2336853
ERA2336854
ERA2336855
ERA2336857
ERA2336858
ERA2336859
ERA2336860
ERA2336861
ERA2336865
ERA2336866
ERA2336867
ERA2336868
ERA2336869
ERA2336870
ERA2336871
ERA2336872
ERA2336873
ERA2336874
ERA2336875
ERA2336876
ERA2336878
ERA2336879
ERA2336880
ERA2336881
ERA2336882
ERA2336883
ERA2336884
ERA2336885
ERA2336886
ERA2338674
ERA2338675
ERA2338686
ERA2338690
ERA2338691
ERA2338692
ERA2338693
ERA2338694
ERA2338695
ERA2338696
ERA2338697
ERA2338698
ERA2338699
ERA2338700
ERA2338701
ERA2338704
ERA2338705
ERA2338706
ERA2338707
ERA2338708
ERA2338709
ERA2338711
ERA2338712
ERA2338713
ERA2338714
ERA2338715
ERA2338716
ERA2338717
ERA2338718
ERA2338720
ERA2338722
ERA2338723
ERA2338724
ERA2338728
ERA2338730
ERA2338765
ERA2338766
ERA2338767
ERA2338768
ERA2338769
ERA2338770
ERA2338771
ERA2338773
ERA2338778
ERA2338779
ERA2338780
ERA2338781
ERA2338782
ERA2338788
ERA2338790
ERA2338791
ERA2338792
ERA2338793
ERA2338795
ERA2338797
ERA2338799
ERA2338801
ERA2338803
ERA2338804
ERA2338805
ERA2338807
ERA2338809
ERA2338810
ERA2338811
ERA2338812
ERA2338813
ERA2338814
ERA2338815
ERA2338816
ERA2338817
ERA2338819
ERA2338821
ERA2338825
ERA2339554
ERA2339555
ERA2339556
ERA2339557
ERA2339558
ERA2339559
ERA2339560
ERA2339561
ERA2339562
ERA2339563
ERA2339564
ERA2339565
ERA2339566
ERA2339568
ERA2339569
ERA2339570
ERA2339571
ERA2339572
ERA2339573
ERA2339575
ERA2339576
ERA2339577
ERA2339579
ERA2339580
ERA2339581
ERA2339582
ERA2339583
ERA2339584
ERA2339585
ERA2339586
ERA2339587
ERA2339588
ERA2339589
ERA2339590
ERA2339591
ERA2339592
ERA2339593
ERA2339594
ERA2339595
ERA2339596
ERA2339614
ERA2339615
ERA2339616
ERA2339617
ERA2339619
ERA2339620
ERA2339622
ERA2339623
ERA2339624
ERA2339625
ERA2339626
ERA2339627
ERA2339628
ERA2339632
ERA2339633
ERA2339634
ERA2339635
ERA2339636
ERA2339637
ERA2339638
ERA2339640
ERA2339641
ERA2339642
ERA2339643
ERA2339645
ERA2339646
ERA2339647
ERA2339648
ERA2339649
ERA2339650
ERA2339651
ERA2339652
ERA2339653
ERA2339654
ERA2339655
ERA2339656
ERA2339657
ERA2339658
ERA2339659
ERA2339660
ERA2339661
ERA2339662
ERA2339663
ERA2339664
ERA2339665
ERA2339681
ERA2339684
ERA2339685
ERA2339686
ERA2339687
ERA2339688
ERA2339689
ERA2339690
ERA2339691
ERA2339692
ERA2339693
ERA2339694
ERA2339695
ERA2339696
ERA2339697
ERA2339699
ERA2339700
ERA2339701
ERA2339702
ERA2339703
ERA2339704
ERA2339705
ERA2339706
ERA2339707
ERA2339708
ERA2339709
ERA2339710
ERA2339711
ERA2339712
ERA2339713
ERA2339714
ERA2339715
ERA2339716
ERA2339717
ERA2339718
ERA2339719
ERA2339721
ERA2339722
ERA2339723
ERA2339724
ERA2339725
ERA2339726
ERA2339727
ERA2339728
ERA2339729
ERA2339730
ERA2339731
ERA2339732
ERA2339733
ERA2339734
ERA2339735
ERA2339736
ERA2339737
ERA2339738
ERA2339739
ERA2339741
ERA2339742
ERA2339743
ERA2339744
ERA2339745
ERA2339746
ERA2339747
ERA2339748
ERA2339749
ERA2339750
ERA2339751
ERA2339752
ERA2339753
ERA2339755
ERA2339756
ERA2339757
ERA2339758
ERA2339759
ERA2339760
ERA2339761
ERA2339762
ERA2339763
ERA2339764
ERA2339765
ERA2339766
ERA2339767
ERA2339768
ERA2339769
ERA2339770
ERA2339771
ERA2339772
ERA2339773
ERA2339774
ERA2339775
ERA2339776
ERA2339777
ERA2339778
ERA2339779
ERA2339780
ERA2339781
ERA2339782
ERA2339783
ERA2339784
ERA2339785
ERA2339786
ERA2339787
ERA2339788
ERA2339789
ERA2339790
ERA2339791
ERA2339792
ERA2339793
ERA2339794
ERA2339795
ERA2339796
ERA2339797
ERA2339798
ERA2339799
ERA2339800
ERA2339802
ERA2339803
ERA2339804
ERA2339805
ERA2339806
ERA2339807
ERA2342135
ERA2342136
ERA2342138
ERA2342139
ERA2342140
ERA2342141
ERA2342142
ERA2342144
ERA2342146
ERA2342150
ERA2342151
ERA2342153
ERA2342154
ERA2342156
ERA2342157
ERA2342158
ERA2342159
ERA2342160
ERA2342162
ERA2342163
ERA2342164
ERA2342165
ERA2342167
ERA2342168
ERA2342169
ERA2342170
ERA2342171
ERA2342172
ERA2342173
ERA2342174
ERA2342175
ERA2342176
ERA2342177
ERA2342178
ERA2342180
ERA2342181
ERA2342182
ERA2342183
ERA2342184
ERA2342185
ERA2342186
ERA2342187
ERA2342188
ERA2342189
ERA2342190
ERA2342191
ERA2342192
ERA2342193
ERA2342194
ERA2342195
ERA2342196
ERA2342197
ERA2342198
ERA2342199
ERA2342200
ERA2342201
ERA2342203
ERA2342204
ERA2342205
ERA2342206
ERA2342207
ERA2342208
ERA2342209
ERA2342210
ERA2342211
ERA2342212
ERA2342214
ERA2342215
ERA2342216
ERA2342218
ERA2342219
ERA2342220
ERA2342221
ERA2342222
ERA2342224
ERA2342225
ERA2342226
ERA2342227
ERA2342228
ERA2342229
ERA2342230
ERA2342231
ERA2342232
ERA2342233
ERA2342234
ERA2342235
ERA2342236
ERA2342237
ERA2342238
ERA2342239
ERA2342240
ERA2342242
ERA2342243
ERA2342245
ERA2342246
ERA2342247
ERA2342248
ERA2342249
ERA2342250
ERA2342251
ERA2342252
ERA2342253
ERA2342254
ERA2342255
ERA2342256
ERA2342257
ERA2342258
ERA2342259
ERA2342260
ERA2342261
ERA2342262
ERA2342263
ERA2342264
ERA2342265
ERA2342266
ERA2342267
ERA2342268
ERA2342269
ERA2342270
ERA2342271
ERA2342272
ERA2342273
ERA2342274
ERA2342275
ERA2342276
ERA2342277
ERA2342278
ERA2342279
ERA2342280
ERA2342281
ERA2342282
ERA2342283
ERA2342284
ERA2342285
ERA2342286
Comparative genomics shows differences in the electron transport and carbon metabolic pathways of Mycobacterium africanum relative to Mycobacterium tuberculosis and suggests an adaptation to low oxygen tension Other Mycobacterium tuberculosis variant africanum 246.8G Institute of tropical medicine
12 ERP127142 ERA3472944
ERA3475297
Whole-genome sequencing of all M. africanum and M. orygis isolates identified in Norway 2010-2020. Other Mycobacterium orygis
Mycobacterium tuberculosis variant africanum
NORWEGIAN INSTITUTE OF PUBLIC HEALTH
13 SRP034707 SRA122326 Mycobacterium africanum strain:D1 Transcriptome or Gene expression Other Mycobacterium tuberculosis variant africanum 361.2M BioProject
14 SRP047261 SRA185089 TB-ARC - Mali Whole Genome Sequencing Mycobacterium tuberculosis variant africanum 5.7G BioProject
15 SRP047262 SRA185090 TB-ARC - Mali Whole Genome Sequencing Mycobacterium tuberculosis variant africanum 4.6G BioProject
16 SRP051584 SRA221323 DNA extraction and Whole Genome Sequencing of mycobacteria from early positive MGIT (Mycobacteria Growth Indicator Tube) cultures Other Mycobacterium avium
Mycobacterium gordonae
Mycobacterium intracellulare
Mycobacterium kansasii
Mycobacterium malmoense
Mycobacterium marinum
Mycobacterium szulgai
Mycobacterium tuberculosis
Mycobacterium tuberculosis complex
Mycobacterium tuberculosis variant africanum
Mycobacterium tuberculosis variant bovis BCG
Mycobacterium xenopi
Mycobacteroides abscessus
Mycobacteroides chelonae
Mycolicibacterium fortuitum
Pseudomonas aeruginosa
Stenotrophomonas maltophilia
Stenotrophomonas sp. L21878
mixed culture
66.2G BioProject
17 SRP064893 SRA305364
SRA309413
SRA431818
SRA434137
The methylome of Mycobacterium tuberculosis complex (MTBC) Other Mycobacterium tuberculosis
Mycobacterium tuberculosis variant africanum
Mycobacterium tuberculosis variant bovis
Mycobacterium tuberculosis variant bovis BCG
Mycobacterium tuberculosis variant microti
61.8G BioProject
18 SRP068011 SRA327095
SRA328779
Mycobacterium tuberculosis Genome sequencing and assembly Other Mycobacterium tuberculosis
Mycobacterium tuberculosis variant africanum
Mycobacterium tuberculosis variant bovis
80.6G BioProject
19 SRP117784 SRA608812 Mycobacteria species Raw sequence reads Other Mycobacterium
Mycobacterium angelicum
Mycobacterium arosiense
Mycobacterium avium
Mycobacterium colombiense
Mycobacterium gordonae
Mycobacterium intracellulare
Mycobacterium intracellulare subsp. chimaera
Mycobacterium kansasii
Mycobacterium lentiflavum
Mycobacterium malmoense
Mycobacterium marinum
Mycobacterium marseillense
Mycobacterium palustre
Mycobacterium paraffinicum
Mycobacterium shimoidei
Mycobacterium simiae
Mycobacterium sp. 'ratisbonense'
Mycobacterium szulgai
Mycobacterium triplex
Mycobacterium tuberculosis
Mycobacterium tuberculosis variant africanum
Mycobacterium tuberculosis variant bovis
Mycobacterium xenopi
Mycobacteroides abscessus
Mycobacteroides chelonae
Mycobacteroides immunogenum
Mycolicibacterium brisbanense
Mycolicibacterium farcinogenes
Mycolicibacterium fortuitum
Mycolicibacterium llatzerense
Mycolicibacterium mageritense
Mycolicibacterium peregrinum
Mycolicibacterium porcinum
Mycolicibacterium septicum
Mycolicibacterium smegmatis
745.1G BioProject
20 SRP152720 SRA735322
SRA735338
Mycobacterium tuberculosis Raw sequence reads Other Mycobacterium tuberculosis
Mycobacterium tuberculosis variant africanum
Mycobacterium tuberculosis variant bovis
49.1G BioProject