Project Detail : PRJDB5687

AccessionPRJDB5687
Project TypePrimary submission
Project Data TypeGenome Sequencing, Transcriptome or Gene Expression

General info

Project titleCaenorhabditis inopinata (sp. 34) genome sequencing project
Project Description
The gonochoric nematode Caenorhabditis inopinata (formerly known as sp. 34) is the sister species of C. elegans. It was isolated from fresh syconia of the fig Ficus septica in Ishigaki island, Japan. Genome references of C. inopinata and C. elegans provide an outstanding platform to perform evolutionary biological studies.
Release Date2017-04-13
RelevanceEvolution
RelevanceEvolution

Project Type

Sample scope/Material/Capture/Methodology

Sample ScopeMonoisolate
MaterialGenome
CaptureWhole
MethodologySequencing

Objective

ObjectiveRawSequenceReads, Sequence, Analysis, Assembly, Annotation
Locus tag prefixCino

Target

Organism information

Organism nameCaenorhabditis sp. 34 TK-2017
Taxonomy ID1978547
Strain,breed,cultivarNKZ35

General Properties

CellularityMulticellular
ReproductionSexual
Haploid genome size123 Mb
PloidyDiploid

Phenotype

Biotic RelationshipFreeLiving
Trophic LevelHeterotroph

Ecological Environment

HabitatTerrestrial
SalinityNonHalophilic
Oxygen requirementAerobic
Temperature rangeMesophilic
Optimum Temperature27 Celsius