Study Detail

TitleA Pilot Study for Channel Catfish Whole Genome Sequencing and de novo Assembly
Study TypePooled Clone Sequencing
Abstract As a pilot project for whole genome sequencing of the catfish genome, here we attempt to determine the proper sequence coverage, the proper software for assembly, and various parameters used for the assembly of a BAC physical map contig spanning approximately a million of base pairs. A combination o .. [more]
Description Twenty-four BAC clones from a large contig of catfish physic map were selected for sequencing and assembly. The BAC DNA was extracted and pooled for sequencing using one lane for Illumina sequncing and 1/4 plate for Roche 454 sequencing.
Center NameAuburn