Search Results ( 351 studies )

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#STUDYSUBMISSIONSTUDY_TITLESTUDY_TYPEORGANISM BASESSUBMITTEDCENTER_NAME
1 DRP002873 DRA004282 Characterization of endoribonucleases project Other synthetic construct 2.2G 2016-01-06 WASEDA
2 DRP003141 DRA004562 Endoribonuclease1 Other synthetic construct 551.7M 2016-03-14 WASEDA
3 DRP003622 DRA004579 RNase characterization Other synthetic construct 438.9M 2016-03-23 WASEDA
4 DRP004461 DRA006546 RNase characterization Other synthetic construct 259.2M 2018-02-07 AIST
5 DRP004964 DRA008257 RNase characterization Other synthetic construct 1.5G 2019-04-11 WASEDA
6 DRP005780 DRA009383 HT-SELEX against human transglutaminase 2 Other synthetic construct 71M 2019-12-12 RIBOMIC
7 DRP005781 DRA009384 HT-SELEX against human intergrin alphaV beta3 Other synthetic construct 41.9M 2019-12-12 RIBOMIC
8 ERP001776 ERA1553563
ERA1619303
ERA1752622
ERA176462
ERA1824922
ERA2006099
ERA2074763
ERA2141468
ERA222820
ERA2295979
ERA2299458
ERA237530
ERA2380413
ERA239820
ERA2422020
ERA2746729
ERA279256
ERA281392
ERA295593
ERA298432
ERA3010958
ERA318990
ERA326703
ERA3271580
ERA354962
ERA393437
ERA398034
ERA409484
ERA414358
ERA429808
ERA434983
ERA445374
ERA455399
ERA465238
ERA552048
ERA553493
ERA587825
ERA681856
ERA693643
ERA777968
ERA812890
ERA845612
PlasmoGEM__Towards_an_open__access__genome_scale_Plasmodium_genetic_modification_resource Other Anopheles gambiae
Ctenopseustis obliquana
Dendrochilum kingii
Hog cholera virus strain Alfort/M
IncI2 plasmid R721
IncN plasmid pCU1
Neoclinus blanchardi
Paragarjajewia petersi microphtalmus
Plasmid pGIP3124
Plasmodium berghei
Plasmodium falciparum
Rhizopus azygosporus
synthetic construct
uncultured eubacterium WR1103
unidentified
218.9G SC
9 ERP002040 ERA177834
ERA181216
storage of 5 computer files (739 kB) by coding into synthetic DNA oligos, and recovery of original information via high-throughput sequencing Synthetic Genomics synthetic construct 30.2G EBI
10 ERP005776 ERA308409 Evaluating bias-reducing protocols for RNA sequencing library preparation Transcriptome Analysis synthetic construct 440.7M MRC Toxicology Unit, Leicester
11 ERP008935 ERA452106
ERA452213
ERA452228
ERA452354
ERA452355
ERA452358
ERA452359
ERA452360
ERA452361
ERA452363
ERA452364
ERA452366
ERA452368
ERA452369
ERA452370
ERA452371
ERA452372
ERA452471
ERA606176
Analysis of heterodimeric transcription factor complex specificities Other Homo sapiens
synthetic construct
178.2G KI-BN
12 ERP010942 ERA475861
ERA475862
ERA475863
ERA475864
ERA475865
ERA475866
ERA475867
ERA475868
ERA475869
ERA475870
ERA475871
ERA475872
ERA475873
ERA476815
ERA476816
ERA476821
ERA476822
ERA861170
ERA870950
ERA870951
ERA870952
ERA870953
We present the first genome-scale analysis of the effect of CpG methylation on DNA-binding of TFs. Other Homo sapiens
Mus musculus
synthetic construct
717.3G Department of Biosciences and Nutrition, Karolinska Institutet, Sweden
13 ERP011048 ERA458609
ERA459292
ERA678511
SELMAP - SELEX Affinity Landscape Mapping of transcription factor binding sites using integrated microfluidics Other synthetic construct 1G BAR-ILAN UNIVERSITY
14 ERP013228 ERA535374
ERA540518
ERA540527
ERA540528
ERA540532
ERA540533
ERA542330
ERA653295
ERA673506
ONT MinION sequencing of ERCC and HEK293 cDNA Other Homo sapiens
synthetic construct
15.9G McGill University and Genome Quebec Innovation Centre
15 ERP013879 ERA1570329
ERA1659348
ERA1659546
ERA2770396
ERA3180711
ERA3398614
ERA612388
CRISPR_screen_pilot Other Homo sapiens
Saccharomyces cerevisiae
synthetic construct
2.4T The Wellcome Trust Sanger Institute
16 ERP015594 ERA624295 CRISPR Cas3 Plasmid degradation assays Other synthetic construct 2.8G Wageningen University
17 ERP016196 ERA657331 MODER: Efficient discovery of the modular structure of monomeric and dimeric transcription factor binding motifs Other synthetic construct 87.3M Department of Biosciences and Nutrition, Karolinska Institutet, Sweden
18 ERP016411 ERA675819
ERA675852
ERA675853
Additional sequencing coverage for the study by Jolma et al 2013, “DNA-binding specificities of human Transcription factors. This new deeper sequencing data has been used in the publication "Transcription factor family-specific DNA shape readout revealed by quantitative specificity models” Other synthetic construct 94.8G Department of Biosciences and Nutrition, Karolinska Institutet, Sweden
19 ERP016603 ERA678329 Multiparameter functional diversity of human C2H2 zinc finger proteins Other synthetic construct 59M Department of Biosciences and Nutrition, Karolinska Institutet, Sweden
20 ERP017468 ERA763652
ERA970837
Sequence reads from active transcription factor identification assay (ATI) Other Mus musculus
synthetic construct
35.9G Department of Biosciences and Nutrition, Karolinska Institutet, Sweden