Search Results ( 75 studies )

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1 DRP002343 DRA002340 Microbial community analysis of methanogenic enrichments Other mixed culture 147.4M 2014-07-16 AIST
2 DRP003294 DRA005149 Anaerobic enrichment culture affected by heat shock Other mixed culture 3.3G 2015-03-22 UIUC
3 DRP005370 DRA006072 RNA-seq analysis of a methanotrophic co-culture Other Methyloceanibacter caenitepidi
mixed culture
10.4G 2017-08-17 AIST
4 ERP003497 ERA236150 nifH defined community samples used for analysis testing Other mixed culture 2.3M Center for Microbial Ecology at Michigan State University
5 ERP003511 ERA236395 buk defined community sequence data from 454 GS FLX Titanium platform and 454 GS Junior platform Population Genomics mixed culture 2.7M CME
6 ERP003666 ERA242473
Functional genes to assess nitrogen cycling and aromatic hydrocarbon degradation: primers and processing matter Metagenomics mixed culture
soil metagenome
7 ERP003923 ERA250854 microbial_communities_in_activated_sludge_exposed_to AgNPs Other mixed culture 16.4M Rice University, USA
8 ERP004210 ERA260569 Our modified PANDAseq (Assembler) performs a modified statistical analysis using the sequencer supplied quality (Q) scores to find the most likely overlap, computes assembled Q scores for the read overlap region, and handles more complex overlap layouts Population Genomics mixed culture 163M CME
9 ERP005554 ERA300580 New insights of bacteria species associated with bronchiectasis using 16S rDNA pyrosequencing Other mixed culture 13.2M Department of Respiratory & Critical Care Medicine, Peking University Peoples Hospital
10 ERP006657 ERA347216
Analyzing the butyrate-producing communities of vertebrates Other mixed culture 2.5G CME
11 ERP009788 ERA417536 Properties of Soil Pore Space Regulate Pathways of Plant Residue Decomposition and Community Structure of Associated Bacteria Other mixed culture 53.4M Michigan State University
12 ERP010697 ERA445478 Community Rescue in Experimental Metacommunities Other environmental samples <unclassified sequences,environmental samples,mixed culture>
mixed culture
13 ERP012020 ERA478805 Communities that thrive in extreme conditions captured from a freshwater lake Other environmental samples <proteobacteria,species Acidithiobacillus caldus>
mixed culture
14 ERP016005 ERA650997 Methanotrophic denitrification was studied in sequencing batch reactors (SBR) with biomass immobilized in polyurethane foams. The reactors were inoculated with a blend of marine and mangrove sediments (Sed-SBR) and anaerobic sludge (AnS-SBR) under anoxic condition. Methane was provided as the only external electron acceptor and carbon source. Other methane-oxidizing enrichment culture
mixed culture
148.3M Escola de Engenharia de São Carlos, Universidade de São Paulo - São Carlos, SP, Brazil
15 SRP018822 SRA067594 Clinical microbiology Genome sequencing Other Acinetobacter baumannii ADL-209
Bacteroides fragilis ADL-402
Bipolaris sp. ADL-507
Candida albicans ADL-116
Candida tropicalis ADL-339
Citrobacter koseri ADL-326
Citrobacter koseri ADL-328
Cutibacterium acnes ADL-409
Enterobacter cloacae subsp. cloacae ADL-214
Enterobacter cloacae subsp. cloacae ADL-221
Enterobacter cloacae subsp. cloacae ADL-222
Enterococcus faecalis ADL-123
Enterococcus faecalis ADL-335
Enterococcus faecalis ADL-336
Enterococcus faecalis ADL-337
Enterococcus faecalis ADL-338
Enterococcus faecium ADL-333
Enterococcus faecium ADL-334
Escherichia coli ADL-218
Escherichia coli ADL-223
Escherichia coli ADL-226
Escherichia coli ADL-304
Escherichia coli ADL-305
Escherichia coli ADL-306
Escherichia coli ADL-307
Escherichia coli ADL-308
Escherichia coli ADL-309
Escherichia coli ADL-310
Escherichia coli ADL-311
Escherichia coli ADL-312
Escherichia coli ADL-313
Escherichia coli ADL-314
Escherichia coli ADL-316
Escherichia coli ADL-324
Escherichia coli ADL-327
Klebsiella aerogenes ADL-323
Klebsiella pneumoniae ADL-122
Klebsiella pneumoniae ADL-201
Klebsiella pneumoniae ADL-202
Klebsiella pneumoniae ADL-317
Klebsiella pneumoniae ADL-322
Lactobacillus gasseri ADL-351
Mycobacteroides abscessus ADL-503
Mycobacteroides abscessus ADL-514
Prevotella melaninogenica ADL-403
Proteus mirabilis ADL-319
Proteus mirabilis ADL-321
Proteus mirabilis ADL-401
Pseudomonas aeruginosa ADL-106
Pseudomonas aeruginosa ADL-107
Pseudomonas aeruginosa ADL-111
Pseudomonas aeruginosa ADL-113
Pseudomonas aeruginosa ADL-208
Pseudomonas aeruginosa ADL-213
Pseudomonas aeruginosa ADL-315
Pseudomonas aeruginosa ADL-318
Pseudomonas aeruginosa ADL-320
Pseudomonas fluorescens ADL-325
Serratia sp. ADL-207
Staphylococcus aureus ADL-101
Staphylococcus aureus ADL-102
Staphylococcus aureus ADL-103
Staphylococcus aureus ADL-105
Staphylococcus aureus ADL-112
Staphylococcus aureus ADL-117
Staphylococcus aureus ADL-120
Staphylococcus aureus ADL-121
Staphylococcus aureus ADL-206
Staphylococcus aureus ADL-210
Staphylococcus aureus ADL-216
Staphylococcus aureus ADL-225
Staphylococcus aureus ADL-227
Staphylococcus aureus ADL-329
Staphylococcus aureus ADL-330
Staphylococcus aureus ADL-331
Staphylococcus epidermidis ADL-108
Staphylococcus epidermidis ADL-109
Staphylococcus epidermidis ADL-124
Staphylococcus epidermidis ADL-203
Staphylococcus epidermidis ADL-205
Staphylococcus epidermidis ADL-229
Staphylococcus epidermidis ADL-332
Staphylococcus haemolyticus ADL-104
Staphylococcus haemolyticus ADL-204
Staphylococcus lugdenensis ADL-114
Staphylococcus lugdenensis ADL-405
Staphylococcus saprophyticus ADL-215
Stenotrophomonas maltophilia ADL-211
Stenotrophomonas maltophilia ADL-212
Stenotrophomonas maltophilia ADL-224
Streptococcus agalactiae ADL-350
Streptococcus agalactiae ADL-354
Streptococcus gordonii ADL-228
Talaromyces marneffei ADL-501
Trichophyton rubrum ADL-509
[Candida] glabrata ADL-340
[Candida] glabrata ADL-341
[Candida] glabrata ADL-342
[Candida] glabrata ADL-343
[Candida] glabrata ADL-344
[Candida] glabrata ADL-345
human metagenome
mixed culture
10.4G BioProject
16 SRP026203 SRA091398 mixed culture Genome sequencing Whole Genome Sequencing mixed culture 2.6G BioProject
17 SRP028614 SRA097097 Ribosome profiling of interspecific hybrids of Saccharomyces cerevisiae and S. paradoxus. Other Saccharomyces cerevisiae
Saccharomyces cerevisiae x Saccharomyces paradoxus
Saccharomyces paradoxus
mixed culture
50G BioProject
18 SRP033013 SRA111140 Hi-C of a synthetic microbial community Other mixed culture 6.6G BioProject
19 SRP033210 SRA111891 Pathogen infected plant material. (Moniliophthora roreri and Theobroma cacao). Transcriptome or Gene expression Other mixed culture 81G BioProject
20 SRP033257 SRA111871 Meloidogyne hapla and Medicago truncatula Transcriptome or Gene expression Other mixed culture 484.6G BioProject