| 1 |
DRP002343 |
DRA002340
|
Microbial community analysis of methanogenic enrichments |
Other |
mixed culture
|
147.4M |
2014-07-16 |
AIST |
| 2 |
DRP003294 |
DRA005149
|
Anaerobic enrichment culture affected by heat shock |
Other |
mixed culture
|
3.3G |
2015-03-22 |
UIUC |
| 3 |
DRP005370 |
DRA006072
|
RNA-seq analysis of a methanotrophic co-culture |
Other |
Methyloceanibacter caenitepidi
mixed culture
|
10.4G |
2017-08-17 |
AIST |
| 4 |
ERP003497 |
ERA236150
|
nifH defined community samples used for analysis testing |
Other |
mixed culture
|
2.3M |
|
Center for Microbial Ecology at Michigan State University |
| 5 |
ERP003511 |
ERA236395
|
buk defined community sequence data from 454 GS FLX Titanium platform and 454 GS Junior platform |
Population Genomics |
mixed culture
|
2.7M |
|
CME |
| 6 |
ERP003666 |
ERA242473
ERA242474
|
Functional genes to assess nitrogen cycling and aromatic hydrocarbon degradation: primers and processing matter |
Metagenomics |
mixed culture
soil metagenome
|
110.6M |
|
MSUCME |
| 7 |
ERP003923 |
ERA250854
|
microbial_communities_in_activated_sludge_exposed_to AgNPs |
Other |
mixed culture
|
16.4M |
|
Rice University, USA |
| 8 |
ERP004210 |
ERA260569
|
Our modified PANDAseq (Assembler) performs a modified statistical analysis using the sequencer supplied quality (Q) scores to find the most likely overlap, computes assembled Q scores for the read overlap region, and handles more complex overlap layouts |
Population Genomics |
mixed culture
|
163M |
|
CME |
| 9 |
ERP005554 |
ERA300580
|
New insights of bacteria species associated with bronchiectasis using 16S rDNA pyrosequencing |
Other |
mixed culture
|
13.2M |
|
Department of Respiratory & Critical Care Medicine, Peking University Peoples Hospital |
| 10 |
ERP006657 |
ERA347216
ERA351761
|
Analyzing the butyrate-producing communities of vertebrates |
Other |
mixed culture
|
2.5G |
|
CME |
| 11 |
ERP009788 |
ERA417536
|
Properties of Soil Pore Space Regulate Pathways of Plant Residue Decomposition and Community Structure of Associated Bacteria |
Other |
mixed culture
|
53.4M |
|
Michigan State University |
| 12 |
ERP010697 |
ERA445478
|
Community Rescue in Experimental Metacommunities |
Other |
environmental samples <unclassified sequences,environmental samples,mixed culture>
mixed culture
|
201.1M |
|
UNIVERSITY OF ESSEX |
| 13 |
ERP012020 |
ERA478805
|
Communities that thrive in extreme conditions captured from a freshwater lake |
Other |
environmental samples <proteobacteria,species Acidithiobacillus caldus>
mixed culture
|
257.4M |
|
UNIVERSITY OF ESSEX |
| 14 |
ERP016005 |
ERA650997
|
Methanotrophic denitrification was studied in sequencing batch reactors (SBR) with biomass immobilized in polyurethane foams. The reactors were inoculated with a blend of marine and mangrove sediments (Sed-SBR) and anaerobic sludge (AnS-SBR) under anoxic condition. Methane was provided as the only external electron acceptor and carbon source. |
Other |
methane-oxidizing enrichment culture
mixed culture
|
148.3M |
|
Escola de Engenharia de São Carlos, Universidade de São Paulo - São Carlos, SP, Brazil |
| 15 |
SRP018822 |
SRA067594
|
Clinical microbiology Genome sequencing |
Other |
Acinetobacter baumannii ADL-209
Bacteroides fragilis ADL-402
Bipolaris sp. ADL-507
Candida albicans ADL-116
Candida tropicalis ADL-339
Citrobacter koseri ADL-326
Citrobacter koseri ADL-328
Cutibacterium acnes ADL-409
Enterobacter cloacae subsp. cloacae ADL-214
Enterobacter cloacae subsp. cloacae ADL-221
Enterobacter cloacae subsp. cloacae ADL-222
Enterococcus faecalis ADL-123
Enterococcus faecalis ADL-335
Enterococcus faecalis ADL-336
Enterococcus faecalis ADL-337
Enterococcus faecalis ADL-338
Enterococcus faecium ADL-333
Enterococcus faecium ADL-334
Escherichia coli ADL-218
Escherichia coli ADL-223
Escherichia coli ADL-226
Escherichia coli ADL-304
Escherichia coli ADL-305
Escherichia coli ADL-306
Escherichia coli ADL-307
Escherichia coli ADL-308
Escherichia coli ADL-309
Escherichia coli ADL-310
Escherichia coli ADL-311
Escherichia coli ADL-312
Escherichia coli ADL-313
Escherichia coli ADL-314
Escherichia coli ADL-316
Escherichia coli ADL-324
Escherichia coli ADL-327
Klebsiella aerogenes ADL-323
Klebsiella pneumoniae ADL-122
Klebsiella pneumoniae ADL-201
Klebsiella pneumoniae ADL-202
Klebsiella pneumoniae ADL-317
Klebsiella pneumoniae ADL-322
Lactobacillus gasseri ADL-351
Mycobacteroides abscessus ADL-503
Mycobacteroides abscessus ADL-514
Prevotella melaninogenica ADL-403
Proteus mirabilis ADL-319
Proteus mirabilis ADL-321
Proteus mirabilis ADL-401
Pseudomonas aeruginosa ADL-106
Pseudomonas aeruginosa ADL-107
Pseudomonas aeruginosa ADL-111
Pseudomonas aeruginosa ADL-113
Pseudomonas aeruginosa ADL-208
Pseudomonas aeruginosa ADL-213
Pseudomonas aeruginosa ADL-315
Pseudomonas aeruginosa ADL-318
Pseudomonas aeruginosa ADL-320
Pseudomonas fluorescens ADL-325
Serratia sp. ADL-207
Staphylococcus aureus ADL-101
Staphylococcus aureus ADL-102
Staphylococcus aureus ADL-103
Staphylococcus aureus ADL-105
Staphylococcus aureus ADL-112
Staphylococcus aureus ADL-117
Staphylococcus aureus ADL-120
Staphylococcus aureus ADL-121
Staphylococcus aureus ADL-206
Staphylococcus aureus ADL-210
Staphylococcus aureus ADL-216
Staphylococcus aureus ADL-225
Staphylococcus aureus ADL-227
Staphylococcus aureus ADL-329
Staphylococcus aureus ADL-330
Staphylococcus aureus ADL-331
Staphylococcus epidermidis ADL-108
Staphylococcus epidermidis ADL-109
Staphylococcus epidermidis ADL-124
Staphylococcus epidermidis ADL-203
Staphylococcus epidermidis ADL-205
Staphylococcus epidermidis ADL-229
Staphylococcus epidermidis ADL-332
Staphylococcus haemolyticus ADL-104
Staphylococcus haemolyticus ADL-204
Staphylococcus lugdenensis ADL-114
Staphylococcus lugdenensis ADL-405
Staphylococcus saprophyticus ADL-215
Stenotrophomonas maltophilia ADL-211
Stenotrophomonas maltophilia ADL-212
Stenotrophomonas maltophilia ADL-224
Streptococcus agalactiae ADL-350
Streptococcus agalactiae ADL-354
Streptococcus gordonii ADL-228
Talaromyces marneffei ADL-501
Trichophyton rubrum ADL-509
[Candida] glabrata ADL-340
[Candida] glabrata ADL-341
[Candida] glabrata ADL-342
[Candida] glabrata ADL-343
[Candida] glabrata ADL-344
[Candida] glabrata ADL-345
human metagenome
mixed culture
|
10.4G |
|
BioProject |
| 16 |
SRP026203 |
SRA091398
|
mixed culture Genome sequencing |
Whole Genome Sequencing |
mixed culture
|
2.6G |
|
BioProject |
| 17 |
SRP028614 |
SRA097097
|
Ribosome profiling of interspecific hybrids of Saccharomyces cerevisiae and S. paradoxus. |
Other |
Saccharomyces cerevisiae
Saccharomyces cerevisiae x Saccharomyces paradoxus
Saccharomyces paradoxus
mixed culture
|
50G |
|
BioProject |
| 18 |
SRP033013 |
SRA111140
|
Hi-C of a synthetic microbial community |
Other |
mixed culture
|
6.6G |
|
BioProject |
| 19 |
SRP033210 |
SRA111891
|
Pathogen infected plant material. (Moniliophthora roreri and Theobroma cacao). Transcriptome or Gene expression |
Other |
mixed culture
|
81G |
|
BioProject |
| 20 |
SRP033257 |
SRA111871
|
Meloidogyne hapla and Medicago truncatula Transcriptome or Gene expression |
Other |
mixed culture
|
484.6G |
|
BioProject |
