Search Results ( 35 studies )

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#STUDYSUBMISSIONSTUDY_TITLESTUDY_TYPEORGANISM BASESSUBMITTEDCENTER_NAME
1 DRP003803 DRA004592 Genome sequence analysis of African cultivated rice Oryza glaberrima accessions Other Oryza glaberrima 20.2G 2016-03-29 NIG
2 DRP004221 DRA006795 Re-sequencing of upland rice varieties in Africa Other Oryza glaberrima
Oryza glaberrima x Oryza sativa
Oryza sativa Japonica Group
149G 2018-04-22 IRRI
3 ERP001143 ERA081008 A map of wild rice genome variation Whole Genome Sequencing Oryza barthii
Oryza glaberrima
Oryza longistaminata
Oryza meridionalis
Oryza rufipogon
364.7G NCGR
4 ERP023549 ERA960592
ERA960789
IRIGIN project - International Rice Genome Initiative Whole Genome Sequencing Oryza barthii
Oryza glaberrima
Oryza sativa
3.1T Genoscope
5 SRP006310 SRA034783 Oryza glaberrima small RNA discovery and expression profiling Transcriptome Analysis Oryza glaberrima 6.8G 2011-04-06 GEO
6 SRP026352 SRA091697 miR2118-triggered phased siRNAs are differentially expressed during the panicle development of wild and domesticated African rice species Other Oryza barthii
Oryza glaberrima
7.2G GEO
7 SRP032770 SRA110539 Oryza glaberrima Genome sequencing Other Oryza glaberrima 47.1K BioProject
8 SRP032937 SRA100031 Genome-wide mutation spectrum in a mutagenized rice population Exome Sequencing Oryza glaberrima
Oryza sativa
101.6G BioProject
9 SRP033144 SRA111772 Chloroplasts sequencing Other Cenchrus americanus
Digitaria exilis
Dioscorea abyssinica
Dioscorea cayenensis subsp. rotundata
Dioscorea praehensilis
Oryza glaberrima
3.4G BioProject
10 SRP038750 SRA141808
SRA149656
One organism in the OMAP project to determine genome sequence of genome relatives of Oryza sativa Other Oryza glaberrima 462.7G BioProject
11 SRP039343 SRA142911 Oryza glaberrima Genome sequencing Whole Genome Sequencing Oryza glaberrima 1.5G BioProject
12 SRP043473 SRA171976 Oryza glaberrima strain:IRGC103937 Genome sequencing Whole Genome Sequencing Oryza glaberrima 1G BioProject
13 SRP043474 SRA171978 Oryza glaberrima strain:IRGC104574 Genome sequencing Whole Genome Sequencing Oryza glaberrima 1G BioProject
14 SRP051134 SRA215946
SRA218173
Oryza glaberrima Genome sequencing Other Oryza glaberrima 50.6G BioProject
15 SRP070935 SRA359748 Oryza glaberrima Transcriptome or Gene expression Other Oryza glaberrima 6.5G BioProject
16 SRP071857 SRA385386 Oryza glaberrima Raw sequence reads Other Oryza glaberrima 502.9G BioProject
17 SRP106005 SRA558554 Genetic control of amylose content in African rice through bulk segregant analysis Other Oryza glaberrima
Oryza sativa
Oryza sativa x Oryza glaberrima
15.6G BioProject
18 SRP139978 SRA689825 NGS sequencing data on 22 different species or ssp Raw sequence reads Other Anaxagorea crassipetala
Annickia affinis
Anonidium mannii
Cenchrus americanus
Coffea canephora
Digitaria abyssinica
Digitaria acuminatissima
Digitaria adscendens
Digitaria argillacea
Digitaria aristulata
Digitaria exilis
Greenwayodendron suaveolens
Monanthotaxis enghiana
Monocarpia kalimantanensis
Monodora myristica
Neo-uvaria acuminatissima
Oryza
Oryza glaberrima
Oryza sativa
Oryza sativa Indica Group
Oryza sativa Japonica Group
Podococcus acaulis
Podococcus barteri
[Pennisetum] glaucum subsp. monodii
160.3G BioProject
19 SRP144082 SRA697808 Oryza glaberrima and O. barthii Raw sequence reads Whole Genome Sequencing Oryza barthii
Oryza glaberrima
564.6G BioProject
20 SRP150515 SRA1046382
SRA1047465
SRA721638
RICE PLANT ARCHITECTURE DOMESTICATION locus sequencing and assembly Other Oryza barthii
Oryza glaberrima
Oryza nivara
Oryza rufipogon
Oryza sativa Indica Group
161.3G BioProject