Search Results ( 13 studies )

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#STUDYSUBMISSIONSTUDY_TITLESTUDY_TYPEORGANISM BASESSUBMITTEDCENTER_NAME
1 ERP000243 ERA014257
ERA131744
ERA135579
Caroli Genome Project Whole Genome Sequencing Mus caroli 229.7G SC
2 ERP001409 ERA127353 Test_mRNA_seq_of_C57_Bl6xAJ_F1 Transcriptome Analysis Mus caroli 34.9G SC
3 ERP002082 ERA181613 Transcription Factor binding evolution in five mouse species Other Mus caroli
Mus musculus
Mus spretus
mixed sample
52.3G EMBL-EBI
4 ERP005559 ERA300592 RNA-seq data from liver tissues of Mus spretus (SPRET/EiJ ) and Mus caroli (Caroli/EiJ) Transcriptome Analysis Mus caroli
Mus spretus
35.7G EMBL European Bioinformatics Institute
5 ERP016574 ERA678255 Mus caroli genome assembly Other Mus caroli 365.2G European Bioinformatics Institute
6 ERP023198 ERA935643 RNA-seq analysis of Mus caroli and Mus pahari Transcriptome Analysis Mus caroli
Mus pahari
84.6G Flicek group European Bioinformatics Institute (EMBL-EBI)
7 ERP023262 ERA944557 ChIP-Seq analysis of CCCTC-binding factor (CTCF) binding in rodents Whole Genome Sequencing Mus caroli
Mus musculus domesticus
Mus pahari
77.1G Flicek group European Bioinformatics Institute (EMBL-EBI)
8 ERP115598 ERA1977897 RNA-seq of liver samples from adult Ryukyu mice (Mus caroli) Other Mus caroli 8.6G EMBL-EBI
9 SRP040713 SRA149883 Hybridization capture using short PCR products enriches small genomes by Capturing Flanking sequences (CapFlank), which is the title of the manuscript is detail description and proof of principle of how you can enrich and sequence small genomes using Other Escherichia coli
Mus caroli
Mus cervicolor
Mus cookii
Phascolarctos cinereus
Rattus norvegicus
396.8M BioProject
10 SRP043302 SRA170975 Short read transcriptome data for Mus musculus subspecies and two outgroup species, Mus caroli and Mus spretus. Other Mus caroli
Mus musculus castaneus
Mus musculus domesticus
Mus musculus musculus
Mus spretus
25.3G BioProject
11 SRP047116 SRA184390 MHC class II DRB exon 2 gene from Murinae (Rodentia) Other Bandicota indica
Bandicota savilei
Bandicota sp.
Berylmys berdmorei
Berylmys bowersi
Cannomys badius
Chiropodomys gliroides
Crocidura attenuata
Hapalomys longicaudatus
Leopoldamys edwardsi
Leopoldamys neilli
Maxomys
Maxomys surifer
Mus caroli
Mus cervicolor
Mus cookii
Mus fragilicauda
Niviventer
Niviventer fulvescens
Rattus andamanensis
Rattus argentiventer
Rattus exulans
Rattus nitidus
Rattus norvegicus
Rattus rattus
Rattus sakeratensis
Rattus sp. R3 MP-2010
Rattus tanezumi
57.6M BioProject
12 SRP075865 SRA429674 Exome capture of 16 species/strains spanning the phylogenetic diversity of Mus. Other Mus caroli
Mus cervicolor
Mus cookii
Mus macedonicus
Mus minutoides
Mus musculus castaneus
Mus musculus domesticus
Mus musculus molossinus
Mus musculus musculus
Mus pahari
Mus platythrix
Mus spicilegus
Mus spretus
69.7G BioProject
13 SRP190056 SRA868240 Liver transcription of major urinary proteins in house mice and wild relatives Other Mus caroli
Mus macedonicus
Mus musculus
Mus musculus domesticus
Mus musculus musculus
Mus pahari
Mus spicilegus
Mus spretus
22.6G BioProject