1 |
ERP023216 |
ERA1535537
ERA1550973
ERA1553573
ERA1557943
ERA1578064
ERA1599899
ERA1631894
ERA1717809
ERA1737243
ERA2359413
ERA2372615
ERA2380432
ERA2422027
ERA2689530
ERA2746731
ERA2750072
ERA2770399
ERA2934666
ERA3149111
ERA3180715
ERA3198402
ERA3203379
ERA3346488
|
Salmonella_enterica_ancient_DNA_and_modern_demography |
Whole Genome Sequencing |
Allium cepa var. aggregatum
Alternaria brassicicola
Araneus bicentenarius
Arctocephalus forsteri
Athrotaxis laxifolia
Averrhoa carambola
Caedibacter taeniospiralis
Calycadenia fremontii
Calycadenia hooveri
Calycadenia mollis
Calycadenia multiglandulosa
Calycadenia oppositifolia
Calycadenia pauciflora
Calycadenia spicata
Calycadenia truncata
Calycadenia villosa
Canavalia cathartica
Canavalia lineata
Carpelimus sp. HMR-1993
Centruroides margaritatus
Cercospora nicotianae
Chaetophractus villosus
Cheiroseius sp. HMR-1993
Chrysolepis sempervirens
Copidosoma floridanum
Crematogaster cerasi
Cunninghamia lanceolata
Cynodon dactylon
Dolichotis patagonum
Drosophila eugracilis
Drosophila takahashii
Epinotia vertumnana
Eptesicus fuscus
Erodium texanum
Erodium x variabile
Euphorbia marginata
Fagus crenata
Fagus sylvatica
Fuscospora alessandri
Fuscospora fusca
Fuscospora gunnii
Fuscospora solandri
Fuscospora truncata
Geranium cinereum
Geranium macrorrhizum
Geranium maderense
Geranium ocellatum
Glyptostrobus pensilis
Haplopelma schmidti
Helicoverpa armigera
Hemizonia perennis
Hydrurga leptonyx
Hypseocharis sp. Beck s.n.
Kluyveromyces lactis
Leptosphaeria doliolum
Leptosphaeria microscopica
Leucomphalos mildbraedii
Limnanthes douglasii
Lophozonia cunninghamii
Lophozonia glauca
Lophozonia menziesii
Lophozonia moorei
Lophozonia obliqua
Lupinus texensis
Macroglossus minimus
Macroscelides proboscideus
Martes martes
Melittobia digitata
Millerozyma acaciae
Monsonia emarginata
Monsonia vanderietiae
Mycetophilus sp. HMR-1993
Mycoplasma bovis
Neomonachus schauinslandi
Nomascus concolor
Nothofagus antarctica
Nothofagus betuloides
Nothofagus dombeyi
Nothofagus nitida
Nothofagus pumilio
Nothofagus x alpina
Ophion sp. MFW-1996
Oscinella sp. HMR-1993
Osmadenia tenella
Ostrinia nubilalis
Panthera uncia
Pelargonium capitatum
Pelargonium cotyledonis
Penaeus stylirostris
Phlebotomus papatasi
Pleurotus cystidiosus
Pleurotus dryinus
Pleurotus populinus
Pleurotus pulmonarius
Podisus maculiventris
Potos flavus
Puma concolor coryi
Salmonella enterica
Sciadopitys verticillata
Scutigera coleoptrata
Selasphorus rufus
Sequoia sempervirens
Stagonospora bicolor
Stenella plagiodon
Tapinoma sessile
Taxodium distichum
Trema micranthum
Trichomalopsis dubius
Tripsacum andersonii
Trisyngyne balansae
Trisyngyne brassii
Trisyngyne codonandra
Trisyngyne discoidea
Trisyngyne grandis
Trisyngyne perryi
Trisyngyne resinosa
Ursus maritimus
Viviania marifolia
Wendtia gracilis
|
3.1T |
|
Wellcome Sanger Institute |
2 |
SRP002812 |
SRA020844
|
Genome-wide nucleosome position data for 12 yeast species |
Other |
Candida albicans
Debaryomyces hansenii
Kluyveromyces lactis
Lachancea kluyveri NRRL Y-12651
Lachancea waltii
Naumovozyma castellii
Saccharomyces bayanus
Saccharomyces cerevisiae
Saccharomyces mikatae
Saccharomyces paradoxus
Yarrowia lipolytica
[Candida] glabrata
|
1.6G |
2010-07-08 |
GEO |
3 |
SRP025983 |
SRA090950
|
Species-specific factors mediate extensive heterogeneity of mRNA 3' ends in yeasts |
Other |
Debaryomyces hansenii
Kluyveromyces lactis
Saccharomyces cerevisiae
|
1.3G |
|
GEO |
4 |
SRP040331 |
SRA148521
|
An alternative, arginase-independent pathway for arginine metabolism in Kluyveromyces lactis involves guanidinobutyrase as a key enzyme |
Transcriptome Analysis |
Kluyveromyces lactis
|
3.6G |
|
GEO |
5 |
SRP053419 |
SRA237159
|
K. lactis Ste12-myc ChIP-Seq in pheromone-responding a cells |
Other |
Kluyveromyces lactis
|
3.6G |
|
GEO |
6 |
SRP064945 |
SRA305736
|
Transcriptome analysis of Kluyveromyces lactis |
Transcriptome Analysis |
Kluyveromyces lactis
|
4.3G |
|
BioProject |
7 |
SRP078498 |
SRA440462
|
RNA-seq in WT and sir2? K. lactis yeast strains |
Transcriptome Analysis |
Kluyveromyces lactis
|
9.4G |
|
GEO |
8 |
SRP090982 |
SRA482729
|
The ground-state and evolution of promoter directionality revealed by a functional evolutionary approach |
Other |
Debaryomyces hansenii
Kluyveromyces lactis
Saccharomyces cerevisiae
|
36.1G |
|
GEO |
9 |
SRP092335 |
SRA487525
|
Regulation of DNA replication time is crucial for appropriate gene expression |
Other |
Kluyveromyces lactis
Lachancea kluyveri
Naumovozyma castellii
Saccharomyces cerevisiae
Tetrapisispora blattae
Zygosaccharomyces rouxii
[Candida] glabrata
|
63.9G |
|
GEO |
10 |
SRP094069 |
SRA499629
|
ChIP-Seq of constitutively expressed Ndt80-Myc in K. lactis |
Other |
Kluyveromyces lactis
|
7.7G |
|
GEO |
11 |
SRP095700 |
SRA511140
|
RNA-seq in WT and sir2?, sir4? and sum1? in K. lactis yeast strains |
Transcriptome Analysis |
Kluyveromyces lactis
|
9.2G |
|
GEO |
12 |
SRP101508 |
SRA543292
|
Extensive structural differences of closely related 3' mRNA isoforms: links to Pab1 binding and mRNA stability |
Other |
Debaryomyces hansenii
Kluyveromyces lactis
Saccharomyces cerevisiae
|
199.2G |
|
GEO |
13 |
SRP127324 |
SRA640895
|
Allele-specific mRNA expression experiment in lactis-wickerhamii and lactis-marxianus interespecies hybrids |
Other |
Kluyveromyces lactis
Kluyveromyces lactis x Kluyveromyces marxianus
Kluyveromyces lactis x Kluyveromyces wickerhamii
Kluyveromyces marxianus
Kluyveromyces wickerhamii
|
33.1G |
|
GEO |
14 |
SRP159103 |
SRA764631
|
SFP1 (ChIP-seq) |
Other |
Kluyveromyces lactis
Naumovozyma castellii
Saccharomyces cerevisiae
Saccharomyces paradoxus
|
33.7G |
|
GEO |
15 |
SRP159150 |
SRA764690
|
SFP1 (RNA-seq) |
Other |
Kluyveromyces lactis
Naumovozyma castellii
Saccharomyces cerevisiae
Saccharomyces paradoxus
Schizosaccharomyces pombe
[Candida] glabrata
|
12.9G |
|
GEO |
16 |
SRP174059 |
SRA825933
|
Evolutionary dynamic of transcription initiation in yeast |
Other |
Candida albicans
Kluyveromyces lactis
Lachancea kluyveri
Lachancea waltii
Naumovozyma castellii
Saccharomyces bayanus
Saccharomyces mikatae
Saccharomyces paradoxus
Schizosaccharomyces japonicus
Schizosaccharomyces pombe
Yarrowia lipolytica
|
57.9G |
|
BioProject |
17 |
SRP187756 |
SRA856531
|
Transcriptomic comparison of 11 species of yeast in rich media and oxidative stress conditions |
Other |
Kluyveromyces lactis
Lachancea kluyveri
Lachancea thermotolerans
Lachancea waltii
Naumovozyma castellii
Saccharomyces bayanus
Saccharomyces cerevisiae
Saccharomyces kudriavzevii
Saccharomyces mikatae
Saccharomyces paradoxus
Schizosaccharomyces pombe
|
60.2G |
|
BioProject |
18 |
SRP222482 |
SRA964809
SRA964906
SRA966244
|
Resolving noise-control conflict by gene duplication |
Other |
Kluyveromyces lactis
Lachancea kluyveri NRRL Y-12651
Saccharomyces cerevisiae
|
90.5G |
|
BioProject |
19 |
SRP270057 |
SRA1094821
SRA1094841
SRA1094843
|
Ultra-accurate Microbial Amplicon Sequencing Directly from Complex Samples with Synthetic Long Reads |
Other |
Aspergillus oryzae
Candida albicans
Desulfovibrio desulfuricans
Kluyveromyces lactis
Nitrosomonas europaea
Penicillium chrysogenum
Saccharomyces cerevisiae
Salinispora tropica
Trichoderma reesei
feces metagenome
food contamination metagenome
synthetic metagenome
|
980.3M |
|
BioProject |
20 |
SRP299049 |
SRA1177043
|
Protein Kinase A (PKA) inhibition in Saccharomyces cerevisiae and Kluyveromyces lactis |
Other |
Kluyveromyces lactis
Saccharomyces cerevisiae
|
|
|
GEO |