Search Results ( 189 studies )

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#STUDYSUBMISSIONSTUDY_TITLESTUDY_TYPEORGANISM BASESSUBMITTEDCENTER_NAME
1 DRP003446 DRA003006 E. coli DnaA ChAP Other Escherichia coli str. K-12 substr. MG1655 18.2G 2015-02-03 RIKKYO
2 DRP004028 DRA006091 The Correspondence between Raman Spectra and Transcriptomes of Escherichia coli, MG1655 Other Escherichia coli str. K-12 substr. MG1655 16.2G 2017-08-23 UT-ARTSCI
3 DRP005030 DRA005771 Growth inhibition after MazF activation through specific alteration of cellular state rather than through near-indiscriminate RNA cleavage. Other Escherichia coli str. K-12 substr. MG1655 7.4G 2017-05-01 TIT-BB
4 DRP005417 DRA008143 Comparison of sequencing bias for library preparation kit Other Brachyspira pilosicoli
Escherichia coli O157:H7 str. Sakai
Escherichia coli str. K-12 substr. MG1655
Klebsiella aerogenes
Mammaliicoccus sciuri
Mycobacterium interjectum
Mycobacterium malmoense
Serratia liquefaciens
Staphylococcus aureus MW2
Staphylococcus aureus subsp. aureus N315
Staphylococcus capitis
Staphylococcus caprae
Staphylococcus cohnii
Staphylococcus hominis
Staphylococcus hyicus
Staphylococcus intermedius
Staphylococcus lugdunensis
Staphylococcus pasteuri
Staphylococcus pseudintermedius
Staphylococcus saprophyticus
Staphylococcus schleiferi
Staphylococcus simulans
Staphylococcus warneri
Staphylococcus xylosus
Streptobacillus moniliformis
Tsukamurella pulmonis
synthetic metagenome
95.2G 2019-02-13 KYUSH-MS
5 DRP006267 DRA009268 Benchmarks of de novo assemblers for bacterial genomes Other Bordetella bronchiseptica
Escherichia coli O157:H7 str. Sakai
Escherichia coli str. K-12 substr. MG1655
Porphyromonas gingivalis ATCC 33277
Serratia marcescens SM39
36.5G 2019-11-18 TITECH
6 ERP000092 ERA000206 Paired-end sequencing of the genome of Escherichia coli K-12 strain MG1655 using the Illumina Genome Analyzer II Whole Genome Sequencing Escherichia coli str. K-12 substr. MG1655 2.8G ILLUMINA
7 ERP000388 ERA015091 Paired-end sequencing of the genome of Escherichia coli K-12 strain MG1655 using the Illumina Genome Analyzer IIx Whole Genome Sequencing Escherichia coli str. K-12 substr. MG1655 4.6G ILLUMINA
8 ERP004449 ERA276870 ChIP-seq of sigma 70 in wild-type and hns mutant Escherichia coli K-12 MG1655 Whole Genome Sequencing Escherichia coli str. K-12 substr. MG1655 778.4M Wadsworth Center, NY DOH
9 ERP004613 ERA281406 Nitrogen regulatory protein C couples nitrogen stress response and stringent response in nitrogen starved Escherichia coli. Whole Genome Sequencing Escherichia coli str. K-12 substr. MG1655 3.7G Imperial College
10 ERP005237 ERA293570 Modulating the expression of membrane-bound transhydrogenase is the predominant evolutionary strategy to restore redox cofactor balance Population Genomics Escherichia coli str. K-12 substr. MG1655 38.3G ETHZ
11 ERP005543 ERA300501 MG1655 flagellar regulator ChIP-seq (FlhD, FlhC, FliA) Whole Genome Sequencing Escherichia coli str. K-12 substr. MG1655 4.2G Wadsworth Center, NY DOH
12 ERP005933 ERA314668
ERA352809
Escherichia coli K12 RNA sequencing Transcriptome Analysis Escherichia coli str. K-12 substr. MG1655 3.1G GSC
13 ERP006544 ERA339257 MG1655 Flagellar Regulators RNA-seq Transcriptome Analysis Escherichia coli str. K-12 substr. MG1655 5.5G Department of Biomedical Sciences, University at Albany
14 ERP006792 ERA352390
ERA357227
RNA chaperones buffer deleterious mutations in E. coli Other Escherichia coli B str. REL607
Escherichia coli str. K-12 substr. MG1655
3.2G MRC CLINICAL SCIENCES CENTRE, IMPERIAL COLLEGE LONDON, DU CANE ROAD, LONDON W12 0NN, UK
15 ERP007009 ERA358164 Genome-wide ribosome profiling to identify regulatory targets of small RNA RyhB in E.coli Transcriptome Analysis Escherichia coli str. K-12 substr. MG1655 33G Wadsworth Center New York State Department of Health
16 ERP010585 ERA441636
ERA441638
ERA441639
ERA441640
ERA441641
Replication dynamics in double origin E. coli strains Other Escherichia coli str. K-12 substr. MG1655 6.7G Division of Biosciences, Brunel University
17 ERP011979 ERA476725 MiSeq sequencing of e coli K12 Whole Genome Sequencing Escherichia coli str. K-12 substr. MG1655 3.9G Cold Spring Harbor L
18 ERP012236 ERA486655
ERA678315
Transcriptome wide mapping of Hfq mediated RNA-RNA interactions in E. coli (RIL-seq) Other Escherichia coli str. K-12 substr. MG1655 58G The Hebrew University of Jerusalem, Israel
19 ERP013795 ERA551857 Differential RNA-seq for identifying toxin MazF and MqsR cleavage sites, beginning of transcripts and stationary phase cleavage sites in Escherichia coli (mRNA, rRNA and other ncRNA) Transcriptome Analysis Escherichia coli K-12
Escherichia coli str. K-12 substr. MG1655
12.1G Institute of Technology, University of Tartu
20 ERP013928 ERA556158 SuhB associates with Nus factors to facilitate 30S ribosome biogenesis in Escherichia coli Other Escherichia coli str. K-12 substr. MG1655 6.7G WADSWORTH CENTER, NY DEPARTMENT OF HEALTH