FASTQExperiment Detail
| Title | Partinal genome shotgun sequencing of the Pygmy squid, Idiosepius paradoxus |
| Design Description | none provided |
| Organism | Idiosepius paradoxus |
Library Description
| Name | IgDNA |
| Strategy | WGS |
| Source | GENOMIC |
| Selection | RANDOM |
| Layout | SINGLE |
| Construction Protocol | Genomic DNA was obtained from the muscle tissue using the QIAGEN DNeasy mini kit. The genomic DNA was sheared using Branson Sonifier 250. |
Platform
| Platform | LS454 |
| Instrument Model | 454 GS FLX Titanium |
Processing
| PipeSection | |
|---|---|
| Step Index | |
| Prev Step Index | |
| Program | 454 titanium basecaller |
| Version | |
Spot Information
| Number of Reads per Spots | 0 |
| Spot Length | 800 |
Read Spec
| Read Index 0 | |
|---|---|
| Read Label | |
| Read Class | Technical Read |
| Read Type | Adapter |
| Base Coord | 1 |
| Read Index 1 | |
| Read Label | |
| Read Class | Application Read |
| Read Type | Forward |
| Base Coord | 16 |
