FASTQExperiment Detail
| Title | Sample 2 Left CA1 small RNA cDNA library |
| Design Description | F12-DA |
| Organism | Rattus norvegicus |
Library Description
| Name | F12-DA |
| Strategy | CTS |
| Source | TRANSCRIPTOMIC |
| Selection | cDNA |
| Layout | SINGLE |
| Construction Protocol | M. Kawano, C. Kawazu, M. Lizio, H. Kawaji, P. Carninci, H. Suzuki, and Y. Hayashizaki, Reduction of non-insert sequence reads by dimer eliminator LNA oligonucleotide for small RNA deep sequencing, Biotechniques 49 (2010) 751-755. |
Platform
| Platform | ILLUMINA |
| Instrument Model | Illumina Genome Analyzer IIx |
Processing
| PipeSection | |
|---|---|
| Step Index | |
| Prev Step Index | |
| Program | illumina RTA |
| Version | |
| PipeSection | |
| Step Index | |
| Prev Step Index | |
| Program | illumina RTA 1.6.47.1 |
| Version | |
Spot Information
| Number of Reads per Spots | 0 |
| Spot Length | 50 |
Read Spec
| Read Index 0 | |
|---|---|
| Read Label | |
| Read Class | Technical Read |
| Read Type | BarCode |
| Base Coord | 1 |
| Read Index 1 | |
| Read Label | |
| Read Class | Application Read |
| Read Type | Forward |
| Base Coord | 0 |
| Read Index 2 | |
| Read Label | |
| Read Class | Technical Read |
| Read Type | Linker |
| Base Coord | 0 |
