FASTQExperiment Detail
| Title | Genetic heterogeneity of hepatitis C virus in association with antiviral therapy determined by ultra-deep sequencing |
| Design Description | none provided |
| Organism | Hepatitis C virus subtype 1b |
Library Description
| Name | Genetic heterogeneity of hepatitis C virus case13_post |
| Strategy | AMPLICON |
| Source | VIRAL RNA |
| Selection | RT-PCR |
| Layout | PAIRED |
| Orientation | |
| Nominal Length | |
| Nominal Sdev | |
| Construction Protocol | none provided |
Platform
| Platform | ILLUMINA |
| Instrument Model | Illumina Genome Analyzer II |
Processing
| PipeSection | |
|---|---|
| Step Index | |
| Prev Step Index | |
| Program | Illumina pipeline v1.4 |
| Version | |
Spot Information
| Number of Reads per Spots | 0 |
| Spot Length | 130 |
Read Spec
| Read Index 0 | |
|---|---|
| Read Label | |
| Read Class | Application Read |
| Read Type | Forward |
| Base Coord | 1 |
| Read Index 1 | |
| Read Label | |
| Read Class | Application Read |
| Read Type | Reverse |
| Base Coord | 66 |
