Project Detail : PRJDB6664

AccessionPRJDB6664
Project TypePrimary submission
Project Data TypeMetagenome

General info

Project titleMicrobial community associated to Uromyces hawksworthii
Project Description
This research aims to describe the microbial community (bacteria and fungi) within the spores of Uromyces hawksworthii (Basidiomycota: Pucciniales) at telium and ecium phases. This rust fungus often infects Phthirusa stelis (Loranthaceae), a common hemiparasite on trees in the Brazilian cerrado. This study involved the utilization of metagenome analysis, Illumina MiSeq 250bp, including the 16S and ITS genes for bacterial and fungi analysis respectively.
Release Date2018-08-01
RelevanceEnvironmental

Grant 1

TitleBasic Budget
Agency abbreviationKPU
AgencyKyoto Prefectural University

Grant 2

TitleScience without boarders
Agency abbreviationCNPq
AgencyNational Council for Scientific and Technological Development

Project Type

Sample scope/Material/Capture/Methodology

Sample ScopeMonoisolate
MaterialOther
CaptureWhole
MethodologySequencing

Objective

ObjectiveRawSequenceReads, Analysis, Assembly
Locus tag prefixfng

Target

Organism information

Organism namefungus metagenome
Taxonomy ID1670606

General Properties

CellularityMulticellular
Haploid genome size457 Mb
PloidyHaploid

Phenotype

DiseaseRust
Biotic RelationshipParasite
Trophic LevelHeterotroph

Ecological Environment

HabitatHostAssociated
SalinityUnknown
Oxygen requirementAerobic
Temperature rangeUnknown

Project Publication

Publication 1

DOIhttp://www.univie.ac.at/oemykges/wp-content/uploads/2016/11/ozp24_47-58_Rezende_Uromyces_hawksworthii_OA.pdf