| Accession | PRJDB6444 |
|---|---|
| Project Type | Primary submission |
| Project Data Type | Genome Sequencing |
| Project title | Whole genome sequencing project of AM fungi Rhizophagus clarus HR1 |
|---|---|
| Project Description | De novo genome sequencing of arbuscular mycorrhizal (AM) fungi Rhizophagus clarus HR1. Data is used for comparative analysis with model AM fungi R. irregularis in order to understand its symbiotic lifestyle such as auxotrophy and biosignaling. Final goal of our project is improving culture technics and enhancing agricultural use of AM fungi. |
| Release Date | 2018-06-01 |
| Relevance | Agricultural |
Grant 1 | |
| GrantId | JPMJAC1403 |
| Title | Molecular Basis of Symbiotic Networks and its Application |
| Agency abbreviation | JST |
| Agency | Japan Science and Technology Agency |
Sample scope/Material/Capture/Methodology | |
| Sample Scope | Monoisolate |
|---|---|
| Material | Genome |
| Capture | Whole |
| Methodology | Sequencing |
Objective | |
| Objective | RawSequenceReads, Assembly |
| Locus tag prefix | RclHR1 |
Organism information | |
| Organism name | Rhizophagus clarus |
|---|---|
| Taxonomy ID | 94130 |
| Strain,breed,cultivar | HR1 |
General Properties | |
| Cellularity | Multicellular |
| Haploid genome size | 146 Mb |
| Ploidy | Haploid |
Phenotype | |
| Biotic Relationship | Symbiont |
| Trophic Level | Heterotroph |
Ecological Environment | |
| Habitat | Terrestrial |
| Salinity | NonHalophilic |
| Oxygen requirement | Aerobic |
| Temperature range | Mesophilic |
