Project Detail : PRJDB6262

AccessionPRJDB6262
Project TypePrimary submission
Project Data TypeMetagenome, Targeted Locus (Loci)

General info

Project title16S rRNA next generation sequencing of bacterial community from Tama River
Project Description
In an effort to determine genus- or species-level taxonomic profiles and diversity of bacterial consortia in the Tama River around urban Tokyo, next generation sequencing (NGS) technology targeting 16S rRNA gene amplicon was employed. Metagenomic analysis was performed by Ion PGM and MiSeq after sequentially filtering samples through 5, 0.8 and 0.2 µm.
Release Date2019-08-22

Project Type

Sample scope/Material/Capture/Methodology

Sample ScopeEnvironment
MaterialGenome
CaptureTargetedLocusLoci
MethodologySequencing

Objective

ObjectiveRawSequenceReads

Target

Organism information

Organism nameriverine metagenome
Taxonomy ID1646512