Project Detail : PRJDB5657

AccessionPRJDB5657
Project TypePrimary submission
Project Data TypeGenome Sequencing

General info

Project titleIdentification of homoeologous single nucleotide polymorphisms in Brachypodium hybridum
Project Description
We sequenced an allopolyploid grass Brachypodium hybridum and its ancestor Brachypodium stacei to identify their sequence differences between homoeologs. Genomic DNA from leaf tissues of B. hybridum and B. stacei were extracted by using the DNeasy Plant Mini Kit (QIAGEN). Libraries for single-end DNA sequencing were obtained by using the Ion Xpress Plus Fragment Library Kits (Life Technologies). The sequencing analysis was performed using the Ion Proton sequencer (Life Technologies).
Release Date2017-07-19

Project Type

Sample scope/Material/Capture/Methodology

Sample ScopeMultispecies
MaterialGenome
CaptureWhole
MethodologySequencing

Objective

ObjectiveRawSequenceReads

Target

Organism information

Organism nameBrachypodium
Taxonomy ID15367