Project Detail : PRJDB5617

AccessionPRJDB5617
Project TypePrimary submission
Project Data TypeGenome Sequencing

General info

Project titleQTL-seq for heading date in SYF2
Project Description
In this study, to identify candidate genomic regions regulating days to heading (DTH), we performed QTL-seq analysis based on combining whole-genome re-sequencing and bulked-segregant analysis (BSA) using F2 population derived from crosses between Shinanotsubuhime and Yuikogane.
Release Date2019-03-16
RelevanceAgricultural

Project Type

Sample scope/Material/Capture/Methodology

Sample ScopeMultiisolate
MaterialGenome
CaptureWhole
MethodologySequencing

Objective

ObjectiveRawSequenceReads

Target

Organism information

Organism nameSetaria italica
Taxonomy ID4555
Strain,breed,cultivarF2 population
Description
F2 population derived from crosses between "Shinanotsubuhime" and "Yuikogane" both Japanese cultivars.

Organism Replicon 1

Name2
TypeeChromosome
LocationeNuclearProkaryote
Size510 Mb

General Properties

CellularityMulticellular
ReproductionSexual
Haploid genome size510 Mb
PloidyDiploid