Accession | PRJDB5617 |
---|---|
Project Type | Primary submission |
Project Data Type | Genome Sequencing |
Project title | QTL-seq for heading date in SYF2 |
---|---|
Project Description | In this study, to identify candidate genomic regions regulating days to heading (DTH), we performed QTL-seq analysis based on combining whole-genome re-sequencing and bulked-segregant analysis (BSA) using F2 population derived from crosses between Shinanotsubuhime and Yuikogane. |
Release Date | 2019-03-16 |
Relevance | Agricultural |
Sample scope/Material/Capture/Methodology | |
Sample Scope | Multiisolate |
---|---|
Material | Genome |
Capture | Whole |
Methodology | Sequencing |
Objective | |
Objective | RawSequenceReads |
Organism information | |
Organism name | Setaria italica |
---|---|
Taxonomy ID | 4555 |
Strain,breed,cultivar | F2 population |
Description | F2 population derived from crosses between "Shinanotsubuhime" and "Yuikogane" both Japanese cultivars. |
Organism Replicon 1 | |
Name | 2 |
Type | eChromosome |
Location | eNuclearProkaryote |
Size | 510 Mb |
General Properties | |
Cellularity | Multicellular |
Reproduction | Sexual |
Haploid genome size | 510 Mb |
Ploidy | Diploid |