Project Detail : PRJDB4593

AccessionPRJDB4593
Project TypePrimary submission
Project Data TypeGenome Sequencing

General info

Project titleComplete genome of Rhizobacter gummiphilus NBRC 109400
Project Description
The NBRC Whole Genome Shotgun Project aims to provide "reference genomes" of NBRC culture collection strains for identifying useful genes for taxonomic classification, risk/safety assessment, and industrial application, and for understanding the structure and evolution of microbial genomes. One of our goals is to sequence 2,000 representative strains in the NBRC culture collection. The sequence information will be released to the society through the NBRC web site (http://www.bio.nite.go.jp/ngac/e/project_wgs-e.html) and DDBJ/EMBL/GenBank databases.
Release Date2016-02-26
RelevanceIndustrial

External Link 1

URLhttp://www.nite.go.jp/en/nbrc/genome/project/wgs/project_wgs.html
DescriptionWhole Genome Shotgun Project

Biomaterial provider

Biomaterial providerNBRC 109400

Project Type

Sample scope/Material/Capture/Methodology

Sample ScopeMonoisolate
MaterialGenome
CaptureWhole
MethodologySequencing

Objective

ObjectiveSequence, Assembly
Locus tag prefixRS1

Target

Organism information

Organism nameRhizobacter gummiphilus
Taxonomy ID946333
Strain,breed,cultivarNBRC 109400

Phenotype

Biotic RelationshipFreeLiving
Trophic LevelHeterotroph

Prokaryote Morphology

ShapeBacilli
GramNegative
MotilityYes

Ecological Environment

Oxygen requirementFacultative
Temperature rangeMesophilic

Project Publication

Publication 1

PubMed ID22142727

Publication 2

PubMed ID23863290