Project Detail : PRJDB3858

AccessionPRJDB3858
Project TypePrimary submission
Project Data TypeGenome Sequencing

General info

Project titlePhtheirospermum genome sequence
Project Description
Phtheirospermum japonicum is the facultative parasitic plants belonging to Orobanchaceae. Whole genome of P. japonicum was sequenced with illumina pair-end and mate-pair sequences to make a draft genome for comparative analysis of parasitic plants.
Release Date2017-04-19
RelevanceEvolution
RelevanceEvolution

Grant 1

GrantId221S0002
TitleGenome Science
Agency abbreviationMEXT
Agencythe Ministry of Education, Culture, Sports, Science and Technology of Japan

Grant 2

GrantId25128716
TitleGenetic Bases for the Evolution of Complex Adaptive Traits, Evolution and adaptation of parasitic traits in Orobanchaceae
Agency abbreviationMEXT
Agencythe Ministry of Education, Culture, Sports, Science and Technology of Japan

Grant 3

GrantId25711019
TitleMolecular mechanisms of plant parasitism
Agency abbreviationJSPS
AgencyJapanese Society for the Promotion of Science

Project Type

Sample scope/Material/Capture/Methodology

Sample ScopeMonoisolate
MaterialGenome
CaptureWhole
MethodologySequencing

Objective

ObjectiveSequence

Target

Organism information

Organism namePhtheirospermum japonicum
Taxonomy ID374723
Strain,breed,cultivarOKAYAMA
Description
Pure line after 5-times self pollination

General Properties

Haploid genome size1400 Mb
PloidyDiploid

Project Publication

Publication 1

DOI10.1371/journal.pone.0025802