Project Detail : PRJDB3293

AccessionPRJDB3293
Project TypePrimary submission
Project Data TypeMetagenome

General info

Project titlepig_bacteria
Project Description
Target of the study is intestinal bacteria isolated from domestic pigs, wild boars, domesticated Red river hogs, wild red river hogs, domesticated warthogs,wild warthogs. Metagenomic analysis on fecal microbiota of domestic pigs, wild boars, domesticated Red river hogs, and wild red river hogs is also focused.
Release Date2015-09-03
RelevanceEvolution
RelevanceEvolution

Grant 1

GrantId25292165
TitleInnovation of the novel probiotics for livestock by understanding the coevolution of intestinal bacteria and hosts
Agency abbreviationJSPS
AgencyJapan Society for the Promotion of Science

Grant 2

GrantId221S0002
TitleGenome Science
Agency abbreviationMEXT
AgencyMinistry of Education, Culture, Sports, Science and Technology

Biomaterial provider

Biomaterial providerUshida Kazunari

Project Type

Sample scope/Material/Capture/Methodology

Sample ScopeEnvironment
MaterialGenome
CaptureRandomSurvey
MethodologySequencing

Objective

ObjectiveRawSequenceReads, Annotation

Target

Organism information

Organism namepig gut metagenome
Taxonomy ID1510822

Ecological Environment

HabitatHostAssociated
SalinityNonHalophilic
Oxygen requirementAnaerobic
Temperature rangeMesophilic
Optimum Temperature37 Celsius

Project Publication

Publication 1

PubMed ID26315488