Project Detail : PRJDB3042

AccessionPRJDB3042
Project TypePrimary submission
Project Data TypeTargeted Locus (Loci)

General info

Project titleElevated CO2 alternate the community structure of rice root-associated bacteria
Project Description
The effects of free-air carbon dioxide enrichment (FACE) on the rice root-associated bacterial community were evaluated by 16S ribosomal RNA gene sequencing. We tested three rice (Oryza sativa L.) cultivars (Koshihikari, Akita 63, Takanari) and two near isogenic lines (NILs) of Koshihikari. Field-grown rice roots were sampled 56 days after transplanting, and root associated bacteria were extracted by the bacterial cell enrichment. 16S rRNA genes were amplified using 27F and 518R primers and subjected to pyrosequencing.
Release Date2015-02-06

Project Type

Sample scope/Material/Capture/Methodology

Sample ScopeEnvironment
MaterialOther
CaptureTargetedLocusLoci
MethodologySequencing

Objective

ObjectiveRawSequenceReads

Target

Organism information

Organism nameuncultured bacterium
Taxonomy ID77133
Description
Bacterial community associated with rice root.